Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g2431 ATGGCTAACTTGGAAATAGAAGAGGAGCCAATGCTATCATCAAATGCACAATCATCCCATGAACTCAAGTATTCTAGTTTCCGGAGGATCCTATCAAGGAGACGAAGCGCATCCATGTACATTCCCATGGTGTCTATGGAGCCATATTACAACAGAGAACCAAGTCTTGGAGAGCATAGTCGTCGTCAACTTAACAGCGTTAGAACCTTCCCGCCCAAGATTGATGAACTATATGCCACCCTTGGAACCCAAAATATTTTCAAACAGAGTGGAGTTACTGTGACTGAAAACAGTGAAAACAACTGGGACGACAACTATGATTGGGAACACACACCACCCGCAGTGAGCGTTGGGCAACAGGGATTGATTTGTAATAATTATTTTTGTATTAGGGTCGGTACTCATGATAATGCTCACCAAGGAATTCCAAGAACTCCCAGTAGATTTGATCAAGAGTACCACGATGACATTCATGGTGATGAAGAGGGTTTTGTCAAAAAAGTGTTATCATTCATCTCTTCATGTATTCCTAAAGTTATAAGCCCACACTCAAAACGCGTCAAGCAATGGAACAAGATTATAGCTATCTTTTGCTTGGTGGCAATATTTCTCAATCCATTATTTTTCTTCATACCGTATGTACAAAAGGATTTCAATTGCATTGTTATCAACTGGACAAGGACAATACCACTTGTTGTACTTAGAAGCTTGAATGATTTAGTGTATTTCTTGAATATACTTCTTCAGTTTAGGTTGGCTTATGTTTCTGCTAGTACTGGATCAAGGGTGATTGATATAGTTGACCATCCAAAAGAGATTGCTATGCATTATTTGCATAGCTATTTTCTTCTTGATTTATTTGTAGTGATTCCTTTGCCTCAGATAATAATATTGTTTGTGCTACCAAAGTACTTGGGTTCATCAGGAGCAAATCATTCAAAGAATCTTATATCTGCAGTGATCCTTGTGCAATACATTCCCAGATTATTCAGGTTCTTGCCATTGCTAATTGGCCAATCTCCAGCAGGAATCATATTTGAGTCAGCCTGGGCAAGTTGCACTCTCAATCTTCTCATTTTTATGCTCTCTGGCCATATTGTTGGCTCTTGTTGGTATCTCTTTGGACTTCAGAGAGTTAATCAATGTTTGCTAGACGCTTGCCATAATGCTAAGATCATTGGTTGCATGAAATATGTGGATTGTGGAAAAGGACATTCCTCTCACCAGACACAAGATTTGTGGACAAACAACGTAAATGCCACATCTTGTTTGAATTCGTTGTCTGGGGCTTTTGATTATGGGATCTATGCCGATGTTGTTCGACTTACTACAGGAAGCAACTTGATCAAAAAATATTTGTATGCACTTTTTTGGGGCTTCCAGCAAATCAGTACTCTTGCTGGTAATCTAACCCCAAGTGATTTTGAGTTGGAAGTCCTTTTCACAATGATAATCATAGGATTGGGGCTCTTGCTTTTTGCGCTTCTCATTGGAAACATACAAAACTTTCTCCAAAGTCTCGGACAAAGAACACTAGAAATGCAACTTAGAAGCCGTGAAGTTGAGCAATGGATGAACCAGTTTCACTTATCAGAAGATCTAAGAAAGAGGATCAGACATGCCGAAAGGTATAATTGGGTGGCAACAATAGGGATGAATGCACAAATGCTTATGGAAAATATGCCAGAAGATCTACAGAGAGACATAAGACGTCATCTCTTCGAATTTATTAAGAAAATTCGAATTTTCAGCTTAATGGATGAGCCTATTTTAGACGCCATTTGTGAGAGGCTTAGGCAAAAAGTATACTTCAAAGGAAGTACTATTTTGCATCCTGGTGATTTGGTAGAGAAAATGTTCTTTGTTTTGCGTGGGGAATTAAAGAGCATTGGCGAAGATGGAACTAGAGTTTTTTTAACCGAAAGGGATGCTTGTGGTGAAGAACTTCTAATATGGTGTCTTGAAAATTCTTCAGTTAGCACAGATGGTAAAAAGGCATGGCTTCCTGGACCAAGATTACTTAGCAGAAGGACAGTAACGTGTTTAACGAATGTGGAGGTATATTCAATTGGAGCTGCTGACCTAGAAGCAATTACAATCCGTTTCACAAGATTCTTGCGAAATCCACCTGTTCAAAGAGCATTGAGATTTGAATCACCTTATTTGAGATCCGTTGCAGCAACACGGATTCAAGTTGCATGGAGAAAATACAGGGAAAGACAACTAAAACGTGCTCTCTCACAAGCAAATTATTATTAG 2259 0.3904 MANLEIEEEPMLSSNAQSSHELKYSSFRRILSRRRSASMYIPMVSMEPYYNREPSLGEHSRRQLNSVRTFPPKIDELYATLGTQNIFKQSGVTVTENSENNWDDNYDWEHTPPAVSVGQQGLICNNYFCIRVGTHDNAHQGIPRTPSRFDQEYHDDIHGDEEGFVKKVLSFISSCIPKVISPHSKRVKQWNKIIAIFCLVAIFLNPLFFFIPYVQKDFNCIVINWTRTIPLVVLRSLNDLVYFLNILLQFRLAYVSASTGSRVIDIVDHPKEIAMHYLHSYFLLDLFVVIPLPQIIILFVLPKYLGSSGANHSKNLISAVILVQYIPRLFRFLPLLIGQSPAGIIFESAWASCTLNLLIFMLSGHIVGSCWYLFGLQRVNQCLLDACHNAKIIGCMKYVDCGKGHSSHQTQDLWTNNVNATSCLNSLSGAFDYGIYADVVRLTTGSNLIKKYLYALFWGFQQISTLAGNLTPSDFELEVLFTMIIIGLGLLLFALLIGNIQNFLQSLGQRTLEMQLRSREVEQWMNQFHLSEDLRKRIRHAERYNWVATIGMNAQMLMENMPEDLQRDIRRHLFEFIKKIRIFSLMDEPILDAICERLRQKVYFKGSTILHPGDLVEKMFFVLRGELKSIGEDGTRVFLTERDACGEELLIWCLENSSVSTDGKKAWLPGPRLLSRRTVTCLTNVEVYSIGAADLEAITIRFTRFLRNPPVQRALRFESPYLRSVAATRIQVAWRKYRERQLKRALSQANYY* 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g2431 752 ProSiteProfiles IQ motif profile. 723 751 IPR000048 GO:0005515
Ahy15g2431 752 SMART cnmp_10 582 717 IPR000595 -
Ahy15g2431 752 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 8 744 - -
Ahy15g2431 752 SUPERFAMILY Voltage-gated potassium channels 182 505 - -
Ahy15g2431 752 PANTHER NUCLEOTIDE GATED CHANNEL PROTEIN, PUTATIVE-RELATED 8 744 - -
Ahy15g2431 752 SUPERFAMILY cAMP-binding domain-like 509 706 IPR018490 -
Ahy15g2431 752 Gene3D Jelly Rolls 580 704 IPR014710 -
Ahy15g2431 752 CDD CAP_ED 582 715 IPR000595 -
Ahy15g2431 752 Gene3D - 190 507 - -
Ahy15g2431 752 Pfam Ion transport protein 192 511 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Ahy15g2431 752 Gene3D Helix hairpin bin 510 574 - -
Ahy15g2431 752 ProSiteProfiles cAMP/cGMP binding motif profile. 582 661 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g2431 Ahy-Chr15 135818784 135831663 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g2431 5 660 Ion Channels AT3G17700 49.481 0.0 612
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g2431 K05391 - ccaj:109789004 872.463