Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g2428 ATGATTTGTCTTTCACATTTATTTATGTGGCTAGCAATTGTGTTCATGTTATTGGCCAACAATTGTTCTGAGATGGCTGATGCACACGAGACTGACAAGAACATTGAGATTTGGAAGATCAAGAAATTGATCAAAGCTCTCGAGGCTGCTAGAGGAAATGGGACAAGTATGATTTCCCTTATCATGCCCCCACGTGATCAAATATCTCGAGTTACCAAGATGCTTGGTGATGAGTTTGGTACTGCTTCCAACATCAAGAGCAGGGTGAACCGGCAGTCTGTGCTTGGGGCCATCACCTCTGCCCAGCAGAGGCTCAAGCTCTATAACAAGGTTCCTCCAAACGGGCTTGTGCTGTATACTGGCACAATTGTTACTGAAGATGGGAAGGAAAAGAAGGTTACTATTGACTTTGAGCCTTTCAGACCTATCAATGCTTCCCTCTATCTGTGTGACAACAAGTTTCATACTGAGGCTCTAAATGAGCTTTTGGAGTCAGATGACAAGTTTGGGTTCATTGTCATGGATGGCAATGGTACCCTGTTTGGCACCTTGAGCGGTAACACAAGGGAAGTGCTTCATAAATTCAGTGTCGATCTCCCAAAGAAGCATGGAAGAGGAGGGCAATCAGCTCTTCGATTTGCCCGTCTTCGCATGGAGAAACGTCATAACTATGTCAGGAAGACTGCAGAGCTTGCAACTCAGTTTTATATCAATCCAGCTACCAGCCAGCCAAATGTTTCTGGATTAATACTTGCTGGTTCAGCTGATTTCAAAACTGAGCTTAGTCAGTCTGATATGTTTGATCCTCGACTCCAAGCAAAAATTCTCAATGTTGTAGATGTTTCCTATGGTGGTGAAAATGGGTTTAATCAGGCTATTGAACTTTCATCTGAGATTCTGTCCAATGTGAAATTTATCCAGGAGAAACGCTTGATTGGAAAATATTTTGAGGAAATTAGCCAGGATACTGGGAAATATGTTTTTGGGGTTGAGGATACTTTGAAAGCTTTGGAGATGGGAGCTGTTGAGACACTCATTGTGTGGGAAAATTTGGATATGAGTAGGTTTGTCTTGAAAAACAGTGCTACTGGTGAGGTTGTCATTCAACACTTCAACAAGGAACAAGAGGCCAATCAGAGCAACTTCCGGGATCCTGTATCCAATGCTGATTATGAGGTGCAGGAAAAAATCTCTCTTTTGGAGTGGTTTGCAAATGAATACAGGCGGTTTGGTTGCACTCTTGAGTTTGTCACAAATAAGTCGCAAGAAGGTTCACAGTTTTGTAGAGGTTTTGGTGGGATTGGTGGTATCTTGCGCTACCAGCTGGACATGAGGACATTTGATGATTTCTCTGATGATGATGCTGTCTATGAATCTGAATAG 1383 0.4266 MICLSHLFMWLAIVFMLLANNCSEMADAHETDKNIEIWKIKKLIKALEAARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFRPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNVSGLILAGSADFKTELSQSDMFDPRLQAKILNVVDVSYGGENGFNQAIELSSEILSNVKFIQEKRLIGKYFEEISQDTGKYVFGVEDTLKALEMGAVETLIVWENLDMSRFVLKNSATGEVVIQHFNKEQEANQSNFRDPVSNADYEVQEKISLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDMRTFDDFSDDDAVYESE* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g2428 460 Gene3D - 303 460 IPR029064 -
Ahy15g2428 460 Pfam eRF1 domain 3 305 442 IPR005142 -
Ahy15g2428 460 Pfam eRF1 domain 2 168 301 IPR005141 -
Ahy15g2428 460 PANTHER EUKARYOTIC PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1-3-LIKE 25 458 - -
Ahy15g2428 460 Pfam eRF1 domain 1 42 162 IPR005140 -
Ahy15g2428 460 TIGRFAM aRF1/eRF1: peptide chain release factor 1, archaeal and eukaryotic forms 36 441 IPR004403 GO:0003747|GO:0006415
Ahy15g2428 460 Gene3D eRF1 domain 2 160 301 IPR042226 -
Ahy15g2428 460 SUPERFAMILY Translational machinery components 166 300 - -
Ahy15g2428 460 PANTHER PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1 25 458 IPR004403 GO:0003747|GO:0006415
Ahy15g2428 460 SMART eRF1_1_2 28 164 IPR005140 -
Ahy15g2428 460 SUPERFAMILY N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 30 164 IPR024049 -
Ahy15g2428 460 SUPERFAMILY L30e-like 302 444 IPR029064 -
Ahy15g2428 460 Gene3D eRF1 domain 1 21 159 IPR024049 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g2428 Ahy-Chr15 135619247 135623220 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g2428 25 458 Eukaryotic Initiation Factors Gene Family AT3G26618 89.631 0.0 810
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g2428 K03265 - gmx:100785916 805.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g2428 15 135619247 135623220 Ahy5g2721 5 105245677 105249660 hybridization