Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g2413 ATGGGTCAGGAATTTTCTCATGAAGGGGTTAATAGCGAGCATACATCATATGATCAGTATGAGCAGGAGGAAGAAAAACATGAGGAAGTTGATGTGGATTATATGGATGAGGATGACACAAATGTGGAACCAATGTTCGATTTTCACGGCTTCGATGAAGGGTATAACATTGACTCACTCGAAGACATTAGGATGATTGAATTTTGGAACATCGGGGATGAAGATGTATGTCATTTTCACTTTTCTGATGTCGACATTGCATTTGAGTTCTACAATAGATATGCAAGGACAAGAGGCTTTAGTGCTCGGAAGAACGGGACTAGGAAGAGTCGTGCGAGCGCACTTAAGTTGAAGAATTTTGTATGTCATCGTGAAGGATTTAGACCGCCAAATAATTACGGCATCGAAAACCTTAAGAGAAAACCTACACCCGAGACAAGGTGTGGCTGCAGTGCAATGATGGAGATTCGTGTAGATGCACCTAGTGGTCGTTGGTTTATTTCTTATTTTTCTGATGAACACAATCATCCGCTTCTGGATCCTCGGTTGACTGGATTGCTCCCTGGGCATAGATTCATGTCCGAGGCTGATATTGGCCACATGGTTAACATGAAAAAGGGTGGGATTAGTGTTGGACAGATATATCGGGCATTAGAAAATCAGGCAGGTGGCTACGAGTATCTCTCTTTCACGCAAAGGGACATGTACAATAAAATAGCAAAGCAGAGGCGCCAATTACCCAATGATGCATATGCAGTTTTGAAGTATCTAGAAGATCAAGCAACAAATGACCCTTCTCTCTATTATAATCATCACATGGATGCTGATAGTACTTTGCGCAATTTATTCTGGTGTGATGGTCTCAGTAGGGCAGACTACTCATTATTTGGCGACGTACTGGCTTTTGATGCTACCTATAAGAGAAATAAATATATGTGTCCACTGGTGGTATTTTCTGGTATCAATCATCATAATCAAACAATTATCTTTGCTGCTGCTTTAATTTGCGATGAGGAAAAAGACACATATAGGTGGTTGCTACAACAACTGAAGGCGGCAATGAATGGGAAAGAACATGTTTCGGTGATCACGGATGGTGATCTATCAATGAAGTTCGCCATTGAGAAAGAGTTTCCTAATGCACATCATAGATTATGTGCATAG 1164 0.4107 MGQEFSHEGVNSEHTSYDQYEQEEEKHEEVDVDYMDEDDTNVEPMFDFHGFDEGYNIDSLEDIRMIEFWNIGDEDVCHFHFSDVDIAFEFYNRYARTRGFSARKNGTRKSRASALKLKNFVCHREGFRPPNNYGIENLKRKPTPETRCGCSAMMEIRVDAPSGRWFISYFSDEHNHPLLDPRLTGLLPGHRFMSEADIGHMVNMKKGGISVGQIYRALENQAGGYEYLSFTQRDMYNKIAKQRRQLPNDAYAVLKYLEDQATNDPSLYYNHHMDADSTLRNLFWCDGLSRADYSLFGDVLAFDATYKRNKYMCPLVVFSGINHHNQTIIFAAALICDEEKDTYRWLLQQLKAAMNGKEHVSVITDGDLSMKFAIEKEFPNAHHRLCA* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g2413 387 MobiDBLite consensus disorder prediction 1 16 - -
Ahy15g2413 387 MobiDBLite consensus disorder prediction 1 30 - -
Ahy15g2413 387 Pfam FAR1 DNA-binding domain 89 179 IPR004330 -
Ahy15g2413 387 Pfam MULE transposase domain 299 386 IPR018289 -
Ahy15g2413 387 PANTHER OS02G0262500 PROTEIN 77 386 - -
Ahy15g2413 387 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 77 386 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g2413 Ahy-Chr15 135324207 135325370 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy15g2413 FAR1 9.40E-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g2413 - - aip:107641043 792.341