Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g2399 ATGGCAGCAAGCACGACTAGCATCCCATCTCACATAAAAGCCTGGGTCTACAATGAATATGGGAACATTGAAGAGACTCTCAAGTTAGACCCAAACATAGCTACACCACAAATCAAGGATGACCAAGTTCTCATCAAGGTTGTGGCTGCAGCCCTTAACCCTGTAGATTATAAGAGGGCCCTTGGACTTTTCAAAGACACTGACTCTCCATTCCCAACAGCTCCAGGGTATGATGTTGCTGGTGTGGTGGTGAAAGTGGGAAGCAAAGTGAAGAAATTTAAGGTTGGAGATGAAGTTTATGGTGATATCAATGAGAATGCTGGGAATCCAAAGGCTATTGGGACCTTAGCAGAGTATACTAGTGCCGAAGAGAAGGTGTTGGCACACAAACCCTCTAATTTGAGCTTTATTGAAGCTTCTAGCCTCCCTTTAGCAATCATCACTGCTTATCAAGGTATCGAGAGAGCTCAATTTTCTTCTGGAAAATCTATTCTTGTTCTTGGAGGTGCTGGTGGAGTTGGAAGCCTTGTTATTCAGTTAGCCAAGCAAGTTTTTGGTGCATCTAAGGTAGCAGCTACTGCTAGTACTGGAAAATTGGAGCTGTTAAGGGAGTTAGGAGCAGACTTGCCTATTGATTATACAAAGGAGAATTTTGAAGAACTGCCAGAAAAATTTGATTTTGTGTATGACACAGTAGGCCAAAGTAACAGGGCATTGAAGGCTACCAAAGAAGGAGGACAAGTAATAACAATAGCAGGACCTGCAAGTCCACCTGCAATATGGTTCTTTCTCCATTCAGATGGTGCAGTCTTGGACAAACTCAAACCTTATTTAGACAGTGGCAAGGTGAAGCCAGTGTTGGATCCAAAGAGCCCTCTCCCATTTTCTAAGGCAATAGAAGCATTTTCCTACCTCAAGACCAATAGAGCCACCGGAAAAGTAGTTATACATCCAATCCCATAA 963 0.4309 MAASTTSIPSHIKAWVYNEYGNIEETLKLDPNIATPQIKDDQVLIKVVAAALNPVDYKRALGLFKDTDSPFPTAPGYDVAGVVVKVGSKVKKFKVGDEVYGDINENAGNPKAIGTLAEYTSAEEKVLAHKPSNLSFIEASSLPLAIITAYQGIERAQFSSGKSILVLGGAGGVGSLVIQLAKQVFGASKVAATASTGKLELLRELGADLPIDYTKENFEELPEKFDFVYDTVGQSNRALKATKEGGQVITIAGPASPPAIWFFLHSDGAVLDKLKPYLDSGKVKPVLDPKSPLPFSKAIEAFSYLKTNRATGKVVIHPIP* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g2399 320 Pfam Zinc-binding dehydrogenase 205 316 - -
Ahy15g2399 320 Gene3D - 19 316 - -
Ahy15g2399 320 Gene3D - 153 267 - -
Ahy15g2399 320 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 134 260 IPR036291 -
Ahy15g2399 320 Pfam Alcohol dehydrogenase GroES-like domain 41 109 IPR013154 -
Ahy15g2399 320 ProSitePatterns Quinone oxidoreductase / zeta-crystallin signature. 161 182 IPR002364 GO:0008270|GO:0016491
Ahy15g2399 320 PANTHER 2-METHYLENE-FURAN-3-ONE REDUCTASE-RELATED 3 320 - -
Ahy15g2399 320 SUPERFAMILY GroES-like 9 168 IPR011032 -
Ahy15g2399 320 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 3 320 IPR044626 GO:0016628
Ahy15g2399 320 SMART PKS_ER_names_mod 21 316 IPR020843 GO:0016491
Ahy15g2399 320 CDD MDR_like_2 13 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g2399 Ahy-Chr15 134982242 134986655 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g2399 68 231 Monolignol Biosynthesis Gene Families AT1G72680 27.461 2.04e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g2399 K18980 - gmx:100791274 495.738