Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g2379 ATGGCTAACTTCGAAATAGAAGAGGAGCCAATGCTGTCACCTCCACAACGATCTGATGGACTCCGGGGTTCGGATTTTCAGGCCCGAAGCAGGTCTATGCACATTCCCATGGTCTCCCACCGAGAAGCAATTCGTACACTTGATAGTGTGAAAACCTTTCCCCAGAAGAAGAGTGGTTCATCGTCATTCTATTCCACTGCCACTCATGAAACTGTACATCTTTCCTCGTCCCGCCGCGGCGGCACAAGCCAACATTCACCCACGTCTGGCCCACTTAGATGGCATCGTGCTATGACAGGAAGGCTTCAATATAATCCTCTTCGAGCAGAGTTTGATAGTATTTTTGAGGGTTCTGCTTGGAGAGTCCCTTCATTCTGCTCTTCATGTGTTCCTGGAGTTATACATCCTGACAGTGTAAAACAATGGAACAAGATTATAGCTATTTTAAGCTTGGCGGCAATATTTTTGGATCCATTATTTTTCTTCTTATTGTATGTTGAAAAGCATTTGAATTGCATTGTTATCAGTCGGACAATGACGAGACCACTTGTTTTACTTAGAAGCATAAATGATTTAGTATATTTCATGAACATGCTTCTCCAGTTTAGGTTGGCTTATGTTTCTGCGGGGTCAAGGTTAAGGGGTACTGATTTAATTGACGATCCAAAGAAAATTGCTCGACATTACCTGACTAGTTATTTCTTTCTTGATTTGTTTATTGCACTTCCTCTACCACAGATAATAGTATTGTTTGTGCTGCCAAGATACTTCGGTGCGAGTCATGCTGAGAGTCTTTTATGTGGAGTGATCCTTGTGCAGTATATCCCCAGGTTATTCCGATTTTTGCCTCTGCTAATTGTCCAGTCTCCAGAAGGATTCATATTTGAGTCAGCATGGACAAATTTTGTTATAAATATCCTCATTTTTATACTATCTGGACATGTCGTTGGCTCTTGTTGGTACCTCTTTGGTTTGCAGAGGGTTAATCAATGTTTGCGAGATGCCTGCCATAATTCAGTTGTTACTCAATGCATGAAGATTATTGATTGTGGGTATGACCGTTTCTCACACTATACATCATCAGATTCAGAAATGTGGAGAAACAATGCAAATGCAACTGCTTGTTTGAATTCCTCTTCTGGTGCTTTTGATTATGGGATATACGCCAATGTTGTACAACTTACTACGCATCCTAAAATAGTCAAGAAGTATGTGTATGCACTGTATTGGGGCTTCCAACAAATCAGTACTCTTGCTGGTAATCAAACCCCTAGTGATTTTGAGTTCGAAGTCCTTTTCTTAATGGCAATCACAGGAATAGGACTCTTGCTTTTTGCACTTTTGATCGGAAACATACAAAACTATCTTCAAGCTCTCGGTCAGAGGACACTAGAAATGCAACTTAGAGGCCGTGATGTTGAGCAATGGATGAGCCAGTTTCACTTACCAGAATATCTTAGAAGGCTGCGGTTTGGTTACGAGAACAGGACAAGAAAAGATACTGGGAACAAGATACAAAGGACAGAGACACAAAAATTAGTATTCTTATTTTTTGTTTGGAAAATAAGACATGTTGAACGGTATAATTGGGCTGCAACAATAGGGGTGAATGCAGAAATGCTTATGGAGAATATGCCAGAAGATCTCCAAAGAGACATAAGGCGTCATCTCTTCAGATTCATTAAGAAAGTTTGA 1695 0.4059 MANFEIEEEPMLSPPQRSDGLRGSDFQARSRSMHIPMVSHREAIRTLDSVKTFPQKKSGSSSFYSTATHETVHLSSSRRGGTSQHSPTSGPLRWHRAMTGRLQYNPLRAEFDSIFEGSAWRVPSFCSSCVPGVIHPDSVKQWNKIIAILSLAAIFLDPLFFFLLYVEKHLNCIVISRTMTRPLVLLRSINDLVYFMNMLLQFRLAYVSAGSRLRGTDLIDDPKKIARHYLTSYFFLDLFIALPLPQIIVLFVLPRYFGASHAESLLCGVILVQYIPRLFRFLPLLIVQSPEGFIFESAWTNFVINILIFILSGHVVGSCWYLFGLQRVNQCLRDACHNSVVTQCMKIIDCGYDRFSHYTSSDSEMWRNNANATACLNSSSGAFDYGIYANVVQLTTHPKIVKKYVYALYWGFQQISTLAGNQTPSDFEFEVLFLMAITGIGLLLFALLIGNIQNYLQALGQRTLEMQLRGRDVEQWMSQFHLPEYLRRLRFGYENRTRKDTGNKIQRTETQKLVFLFFVWKIRHVERYNWAATIGVNAEMLMENMPEDLQRDIRRHLFRFIKKV* 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g2379 564 Pfam Ion transport protein 142 463 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Ahy15g2379 564 SUPERFAMILY Voltage-gated potassium channels 139 457 - -
Ahy15g2379 564 MobiDBLite consensus disorder prediction 72 93 - -
Ahy15g2379 564 Gene3D - 142 459 - -
Ahy15g2379 564 PANTHER NUCLEOTIDE GATED CHANNEL PROTEIN, PUTATIVE-RELATED 103 488 - -
Ahy15g2379 564 PANTHER NUCLEOTIDE GATED CHANNEL PROTEIN, PUTATIVE-RELATED 521 564 - -
Ahy15g2379 564 MobiDBLite consensus disorder prediction 1 27 - -
Ahy15g2379 564 MobiDBLite consensus disorder prediction 72 90 - -
Ahy15g2379 564 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 103 488 - -
Ahy15g2379 564 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 521 564 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g2379 Ahy-Chr15 134477800 134486793 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g2379 74 564 Ion Channels AT3G17700 49.703 6.25e-150 445
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g2379 K05391 - gmx:100785556 540.421