Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g2367 ATGGTTAGAAAAAAGGCAGAAGATGCAGGCCCATCAGCAAAGACTAAGGCAGGTAGCAAAGATGTCCCTAAGAAGGAAAAAGTTTCCATTTCTGCCATGCTGGCCAGCATGGATGAAAAGCCTGATAAACCCAAAAAGCCCTCTTCCATTAAACCCAAGGCAAAAGCTGCTCCAAAACCTTCTGCATATACTGATGGTATTGATCTTCCTCCATCTGACGAAGATGAAGATGAAGCTCTCTTGGAGGAGGAGGAAGAGAATGCCTCCAAACGGCAGCAGAGGAGTGAGTTGAAGACACTTGAAATTTCAACCACAGACAAAGAGCTGAAGAAGCGTGAGAAGAAGGATATTTTAGCAGCTCATGCTGTTGAGCAGGCAAAGAAGGAAGCTCTTAAGGATGATCATGATGCTTTCACTGTGGTCATTGGAAGTCGGACTTCAGTGCTTGATGGAGATGATGATGCTGATGCTAATGTCAAAGATATAACAATAGAGAATTTCTCGGTGTCTGCTCGGGGTAAAGAACTTCTGAAGAATGCATCAGTGAAGATATCTCATGGGAAGAGGTATGGTTTGGTTGGACCCAATGGAAAGGGGAAGTCCACACTATTGAAGCTTCTTTCTTGGAGGAAGATACCAGTACCTAAGAATATTGATGTCCTTCTGGTTGAGCAAGAGGTAGTAGGTGATGATAAAACAGCACTAGAAGCTGTTGTGTCAGCTAATGAAGAACTGGTTAAAGTTCGACAAGAAGTTGCTTCTCTGCAAAATGCAGCTTCTGCAGAAGGAAGTGTTGACAATGAGGAAGATGATGCGGGAGAGAAGCTAGCAGAGCTGTACGAGAAACTACAGCTGATGGGTTCTGATGCTGCTGAAGCTCAAGCATCAAAGATTTTAGCGGGTTTGGGTTTTACAAAGGATATGCAGGGCCGGCCAACAAAATCTTTCAGTGGTGGATGGAGAATGAGGATTTCTTTAGCTCGAGCACTTTTTGTGGTGCCGACTTTGTTATTGCTTGATGAACCCACAAATCACCTTGACTTGAGGGCTGTTCTCTGGCTGGAAGAGTACCTGTGCCGTTGGAAGAAGACTTTGGTTGTTGTTTCACATGATAGGGATTTCCTCAATACAGTTTGCACTGAGATTATTCATCTTCATGACTTGAAACTCCATTTCTACCGTGGAAACTTTGATGACTTTGAGAGTGGGTATGAACAGCGTCGTAAAGAGATGAACAAGAAGTATGAGATTTATGACAAGCAACTAAAAGCTGCAAAAAGGAGTGGTAATCGAGCTCAGCAAGAAAAGGTGAAGGATCGAGCGAAGTTTGTGGCAGCTAAAGAAGCATCTAAAGCCAAGGGAAAGGGCAAGGGCAAGGTTGATGAAGATGAGGCCCCACCAGAGGTTCCACAGAAGTGGAGGGACTACAGTGTTGAATTTCACTTCCCTGAACCTACCGAGCTCACGCCTCCACTTCTTCAGCTTATTGAAGTGAGCTTCAGTTATCCAAACCGTGAGGACTTCAGACTGTCAAATGTTGATGTTGGCATTGATATGGGAACTCGTGTTGCCATTGTTGGGCCTAATGGAGCTGGAAAATCTACACTACTGAACCTTCTGGCTGGTGATTTGGTTCCAACTGAGGGTGAAGTTAGGAGAAGTCAGAAGTTGCGAATAGGAAGATACTCGCAACACTTTGTGGACCTTCTAACTATGGACGAAACCCCCGTTCAGTATCTTCTTCGTCTCCACCCAGACCAGGAGGGACTTAGCAAGCAAGAGGCCGTCCGTGCAAAACTCGGTAAGTTTGGGCTACCTAGTCATAACCATCTCACCCCTATTGCCAAACTATCAGGAGGGCAGAAGGCTAGGGTGGTATTTACCTCAATATCCATGTCAAGACCCCATATTTTGTTGTTGGATGAACCCACTAATCATCTAGACATGCAAAGCATTGATGCGTTGGCTGATGCACTAGACGAGTTCACTGGTGGAGTTGTTCTTGTTAGTCATGACTCGAGATTGATATCACGTGTATGTGAGGATGAAGAAAGGAGTCAGATCTGGGTTGTCGAGGATGGTACTGTCAGGACTTCAATTGGAACATTCGATGATTACAAGGACGAGTTGATGAAAGAAATCAAAGCTGAAGTTGATGACTAA 2163 0.4466 MVRKKAEDAGPSAKTKAGSKDVPKKEKVSISAMLASMDEKPDKPKKPSSIKPKAKAAPKPSAYTDGIDLPPSDEDEDEALLEEEEENASKRQQRSELKTLEISTTDKELKKREKKDILAAHAVEQAKKEALKDDHDAFTVVIGSRTSVLDGDDDADANVKDITIENFSVSARGKELLKNASVKISHGKRYGLVGPNGKGKSTLLKLLSWRKIPVPKNIDVLLVEQEVVGDDKTALEAVVSANEELVKVRQEVASLQNAASAEGSVDNEEDDAGEKLAELYEKLQLMGSDAAEAQASKILAGLGFTKDMQGRPTKSFSGGWRMRISLARALFVVPTLLLLDEPTNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLNTVCTEIIHLHDLKLHFYRGNFDDFESGYEQRRKEMNKKYEIYDKQLKAAKRSGNRAQQEKVKDRAKFVAAKEASKAKGKGKGKVDEDEAPPEVPQKWRDYSVEFHFPEPTELTPPLLQLIEVSFSYPNREDFRLSNVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVPTEGEVRRSQKLRIGRYSQHFVDLLTMDETPVQYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSRPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVCEDEERSQIWVVEDGTVRTSIGTFDDYKDELMKEIKAEVDD* 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g2367 720 Coils Coil 238 258 - -
Ahy15g2367 720 MobiDBLite consensus disorder prediction 84 110 - -
Ahy15g2367 720 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 162 419 IPR003439 GO:0005524
Ahy15g2367 720 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 5 720 - -
Ahy15g2367 720 MobiDBLite consensus disorder prediction 69 83 - -
Ahy15g2367 720 Pfam ABC transporter 177 344 IPR003439 GO:0005524
Ahy15g2367 720 Coils Coil 80 100 - -
Ahy15g2367 720 PANTHER - 5 720 - -
Ahy15g2367 720 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 493 718 IPR003439 GO:0005524
Ahy15g2367 720 CDD ABCF_EF-3 493 695 - -
Ahy15g2367 720 Gene3D - 159 440 IPR027417 -
Ahy15g2367 720 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 472 702 IPR027417 -
Ahy15g2367 720 Pfam ABC transporter 510 645 IPR003439 GO:0005524
Ahy15g2367 720 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 162 396 IPR027417 -
Ahy15g2367 720 MobiDBLite consensus disorder prediction 1 110 - -
Ahy15g2367 720 CDD ABCF_EF-3 162 389 - -
Ahy15g2367 720 Gene3D - 459 720 IPR027417 -
Ahy15g2367 720 MobiDBLite consensus disorder prediction 447 468 - -
Ahy15g2367 720 Coils Coil 408 428 - -
Ahy15g2367 720 SMART AAA_5 519 695 IPR003593 -
Ahy15g2367 720 SMART AAA_5 186 388 IPR003593 -
Ahy15g2367 720 ProSitePatterns ABC transporters family signature. 316 330 IPR017871 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g2367 Ahy-Chr15 133617423 133620996 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g2367 492 705 Calmodulin-binding Proteins AT2G36910 29.583 6.55e-15 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g2367 K06184 - gmx:100806226 1191.02