Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g2327 ATGGAGATTCAGCAAACCCTAAAGCTCATGGTCCACCACCACAACAGAGGAAAGGAAAACAACACACCAAAGCTGAAATGGAGGAAAATTTTCACTCTCCAACGATCACCGCCGTCATCAAAACCCATCCAAACTCCACCGCCGGAAGAGTTCATCTGCCCAATCTCCGGTAATCTAATGGCTGACCCCGTGATCGTATCTTCCGGTCACTCCTTCGAACGAGCGTCGGTACAATCATGCAAGGATCTCAACTTTACCCCTCAACTCTCCGATGGAACCACCCCTGATTTTTCCACCGTGATCCCCAACCTCGCCCTCAAATCCGCCATCTCCAAATGGTGCCACGCGTCATCCACCCTCCTCCCTCAACCCCCACACCGGTCCCTCACCGACAACCTCGTACGGACCCTCATTTTCTCATCTTCCTCCCGCAAAAACAACGCAAACGAGTTAGTGGGAGAGAGAATGCTAACAGCGAACCCTTCTTGTTCTTCTTCTTCTTCCTCCGTTGAGTCTATTGCCACGTCAGCATCGAGCTCCACCCCACCCGCTCAACTCACTGCGAAACCAAGCTTCTGCTACTCTTCACCTTCTTCCTCCGAACTCGAGCCAACAACCCCAGAAGCCGAAGAATTCATCTCGAAGCTTCGGAGCAATCAAGTCTTCTTAATCGAAGAATCTCTGCAGAATCTGAGGAAGCTCACTAGAACTAATGAGGACTCAAGGATCACACTCTGCACCCAAAGGATGCTTTCGTCTTTGCGTGGCCTCGTTGCTTCGAAGTACAAAATGGTTCAGGTGAATGCCGTCGCATGTGTCGTGAACCTCTCTCTGGAGAAAACGAACAAGGTGAGGATCGTACGGTCAGGGTTAGTTCCGCCATTGATAGAAGCTTTGAGGGTTGGATCCTCTGAGGCGCAGGAACACGCTTCCGGTGCGCTCTTCAGTTTAGCGCTTGAAGACGATAATAAAACCGCGATTGGTGTTCTCGGAGCTCTTCCACCGTTGATTCACGCGCTTCGAGTTGGGACTGAGCGGACCCGGCATGACTCAGCCTTGGCGCTTTACCATTTGTCGATGGTTCAAAGTAACAGAACCAAATTGGTTAAGATTGGATCGGTTCCGGTTTTAGTTGGGATGGTTAAGTCTGGTCAGATGACGGGTCGGGTTTTGATGATTTTGGGCAATTTGGGTTGTGGGCCGGATGGGCGGGCTGCAATGTTGGATGTGGATATGGTTGAATGTTTGGTCGGGTTGTTGGCTGGGTCCGAGTCGGTTCATGGATCAATAAAGGAGAGCTGTGTGGCGGTGCTTTACGTGTTGAGTCACGGAGGGTTGAGGTTTAAGGCCTTAGCGAAGGCGGCAGGAGTGGTGGAGGCGCTGGAGAAGGCAGAGAAGGAGGTGGGGAGTCAACGAGCGAAGGAAAAGGCAAGGAGGGTTTTCGAGATGATGAAGGGCAAAGAGGAAGAGGAGGAGGAAGACGTGGATTGGGAGGAGCTACTCGACTCCGGTCTAGGAAGCCGGAGTCACAACCAGCATGATGGCGAGTTTGGCGGGCTAAATGGGACGACCTCATCCTCTGAATTTTGA 1590 0.5189 MEIQQTLKLMVHHHNRGKENNTPKLKWRKIFTLQRSPPSSKPIQTPPPEEFICPISGNLMADPVIVSSGHSFERASVQSCKDLNFTPQLSDGTTPDFSTVIPNLALKSAISKWCHASSTLLPQPPHRSLTDNLVRTLIFSSSSRKNNANELVGERMLTANPSCSSSSSSVESIATSASSSTPPAQLTAKPSFCYSSPSSSELEPTTPEAEEFISKLRSNQVFLIEESLQNLRKLTRTNEDSRITLCTQRMLSSLRGLVASKYKMVQVNAVACVVNLSLEKTNKVRIVRSGLVPPLIEALRVGSSEAQEHASGALFSLALEDDNKTAIGVLGALPPLIHALRVGTERTRHDSALALYHLSMVQSNRTKLVKIGSVPVLVGMVKSGQMTGRVLMILGNLGCGPDGRAAMLDVDMVECLVGLLAGSESVHGSIKESCVAVLYVLSHGGLRFKALAKAAGVVEALEKAEKEVGSQRAKEKARRVFEMMKGKEEEEEEDVDWEELLDSGLGSRSHNQHDGEFGGLNGTTSSSEF* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g2327 529 SMART Ubox_2 50 113 IPR003613 GO:0004842|GO:0016567
Ahy15g2327 529 Pfam U-box domain 48 116 IPR003613 GO:0004842|GO:0016567
Ahy15g2327 529 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 290 327 IPR000225 GO:0005515
Ahy15g2327 529 SUPERFAMILY ARM repeat 210 480 IPR016024 -
Ahy15g2327 529 MobiDBLite consensus disorder prediction 484 529 - -
Ahy15g2327 529 SUPERFAMILY RING/U-box 35 121 - -
Ahy15g2327 529 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 33 121 IPR013083 -
Ahy15g2327 529 PANTHER U BOX DOMAIN-CONTAINING 24 514 - -
Ahy15g2327 529 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 38 24 514 - -
Ahy15g2327 529 ProSiteProfiles U-box domain profile. 46 120 IPR003613 GO:0004842|GO:0016567
Ahy15g2327 529 MobiDBLite consensus disorder prediction 505 529 - -
Ahy15g2327 529 SMART arm_5 400 443 IPR000225 GO:0005515
Ahy15g2327 529 SMART arm_5 238 278 IPR000225 GO:0005515
Ahy15g2327 529 SMART arm_5 320 360 IPR000225 GO:0005515
Ahy15g2327 529 SMART arm_5 279 319 IPR000225 GO:0005515
Ahy15g2327 529 Gene3D - 204 483 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g2327 Ahy-Chr15 132314296 132316467 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g2327 1 529 U-box Gene Family AT5G40140 51.423 1.62e-170 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g2327 - - lja:Lj2g3v1020040.1 593.578