Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g2302 ATGGACACGGCAGTGGTAACGGCGTCGGCGGCGGCAAAAACGGCAACCAGAATGGCGGCGAAAATAGAGTGGAATTTCCTATACGGAGCGGCTACTGTGCATGGTTTGACATTGGTTTCATCAGCGGCGCCAACCTCATCTAGTCAAACAATCATTGTCAAGGCTTCGTTGGATCACTTCCGGAAGAAAGCAGCTTCCATGGCGTTTTCACCCACTGAAGGAGGATCGATTAGTACATTGACCAATCCAACCAAAGGCGATAAACAATTCAGTGCGGGTGAATTAGACATGCAAGAGCAAGTAGGACGGAAGTTCGACGAAATTACCGATGTCGTTGTGACTAGAAAGAATGAGCTGGACGACGGACACCAGTTGCCGGATCATAGTGGCGTAGGCGAAGAGGAAATTCCAGTCGTAGGAATGAGTTTTGGTTCGTTGCCTCTCGCACAGAAATTTTATGCAAACTACGCAAAGAAAGTTGGGTTCGTTACTAAAATCAGGAACACGAATTTCGACAAGACGCGGAAGGAATCAAAGATACCGGTTAATCAATCTATTTATTGCACGCGAGAAGGTTATCGAGAGTCTAGGGTGAACGCAGCAACTCGAGCAAACAGAATTATAGCCATGAGATGCAGAGCAAGGATGTATGTCGTGTTGGACAATGAGAATAAATGTTGGGTTGTGTCTAGATTAGAACTGAGGTATTCTCACCCCTGTTCAGCTGAGAAAGTTGTCCACTATCATGAGTACCGGGAGCTGACCATGCATGCTAAGTGTGTCATTACGTATAACGATGAGGCTGGAATAAGACCCAACAAGACGTATCTAGCACTGGCAAACGAGGTTGGTGGGTCCACAAACCTGGGTTTTTCAGAAAAGGATGTCAGAAATTACATCACACGCAATCTCCGATGCTCCGATGACAATGAGGACTTCCAGGGGATGATGAATTATTTTGTTCGAATGAAGGAGATCAATCCCAACTTCTTTTATGCAATAGATGTTGACGATGCCAATAAATTTAGGAGCGCACTTTGGGTAGATGCAAGGTGCAGGGCTTCGTATGAATATTACGGAGATGTGGTTACAGAAGAAATAGGTGTAAACCACCATGGGAAGTCTACTCTTCTTGGCTGTGCTTTACTTGGGAGCGAGGAGATCTCTAGTTTTGAGTGGGTGTTCACGCAGTGGGTGAGATACGTTGGGACTGCACCAAGGGGGATTATCACTGACCAGTGCAAGGCGATGACTGGTGCTATTAGGAATGTCCTACCTGACACTGTCCATCGATGGTGCATCTGGCACATAATGAAGAAATCACAATTCAAGCTTGGTGGATACTCTAGGTACAGAGAACTGAATGCAATGATGAATCACATTGTGTGGAATTCTCCTACGACTGAATCATTCGAGTCTGATTGGGCTGGTTTCATCAAACAGTTTAAGTTAGGCCAAAACAGATGGTTAGCAGGTAGGTGA 1482 0.4568 MDTAVVTASAAAKTATRMAAKIEWNFLYGAATVHGLTLVSSAAPTSSSQTIIVKASLDHFRKKAASMAFSPTEGGSISTLTNPTKGDKQFSAGELDMQEQVGRKFDEITDVVVTRKNELDDGHQLPDHSGVGEEEIPVVGMSFGSLPLAQKFYANYAKKVGFVTKIRNTNFDKTRKESKIPVNQSIYCTREGYRESRVNAATRANRIIAMRCRARMYVVLDNENKCWVVSRLELRYSHPCSAEKVVHYHEYRELTMHAKCVITYNDEAGIRPNKTYLALANEVGGSTNLGFSEKDVRNYITRNLRCSDDNEDFQGMMNYFVRMKEINPNFFYAIDVDDANKFRSALWVDARCRASYEYYGDVVTEEIGVNHHGKSTLLGCALLGSEEISSFEWVFTQWVRYVGTAPRGIITDQCKAMTGAIRNVLPDTVHRWCIWHIMKKSQFKLGGYSRYRELNAMMNHIVWNSPTTESFESDWAGFIKQFKLGQNRWLAGR* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g2302 493 Pfam MULE transposase domain 367 440 IPR018289 -
Ahy15g2302 493 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 135 491 - -
Ahy15g2302 493 Pfam FAR1 DNA-binding domain 151 240 IPR004330 -
Ahy15g2302 493 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 135 491 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g2302 Ahy-Chr15 131568931 131573113 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy15g2302 FAR1 6.30E-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g2302 - - ahf:112730161 791.956