Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g2231 ATGGTTTCCACCAGTTCTGCCAACGACTTGGCAAGAAGAGAAAAGATCAATGAGAGGATGAAAATTCTTCAGGATTTGGTCCCAGGGTGTAACAAGGTAATTGGTAAAGCTCTTGTCCTAGATAAAATCATCAATTATATTCAGTCACTACAGCGACAAGTTGAGTTCCTGTCAATGAAGCTTGAGGCAGTTAATTCAAGATTGAGCATGAACCCTACAATTGATGGGTTCTCTTCAAAAGATCACCCATTATAG 255 0.3961 MVSTSSANDLARREKINERMKILQDLVPGCNKVIGKALVLDKIINYIQSLQRQVEFLSMKLEAVNSRLSMNPTIDGFSSKDHPL* 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g2231 84 Gene3D - 4 74 IPR036638 GO:0046983
Ahy15g2231 84 Coils Coil 47 67 - -
Ahy15g2231 84 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 11 69 IPR036638 GO:0046983
Ahy15g2231 84 Pfam Helix-loop-helix DNA-binding domain 8 51 IPR011598 GO:0046983
Ahy15g2231 84 SMART finulus 8 56 IPR011598 GO:0046983
Ahy15g2231 84 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 1 50 IPR011598 GO:0046983
Ahy15g2231 84 PANTHER TRANSCRIPTION FACTOR BPE 10 81 - -
Ahy15g2231 84 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 10 81 IPR024097 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g2231 Ahy-Chr15 128821115 128824497 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g2231 4 81 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G59640 79.487 1.52e-35 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy15g2231 HLH 4.80E-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g2231 - - ahf:112748872 157.147