Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g2229 ATGGTGAGGTCTCAGTGCTATGACAAAATTAGTGTCAAAAGGGGTGTTTGGAGTCCAGAAGAAGATGCAAAGATAGTTGCATTTGTGTCAAAGCATGGACCTAGTAACTGGACTTCTGTCCCAAAAAAAGCGGGGCTCAAGAGGTGTGGAAAGAGTTGCAGGTTCCGGTGGACTAATTATCTCAGACCTGATCTTAAGCAAGACACGTTTACATCCCAGGAAGAAGATCTAATCATTAAGCTTCACGCAGCCATAGGAAGCAGGTGGTTCATAATAGCCCAGCAACTCCCTGGGAGAACAGACAATGATGTGAAGAACTACTGGAACACAAAGTTGAAAAAGAAGCTCTCTCAAATGGGAATAGACCCTGTTACTCATAAGCCCTTCTCAAAGCTAATTGCTGATTATGGAAACATTGAGGGTTCTCATAGCCAAAAACCAACTAACCAAACTAGCTTTATCAACAACAAAGACTTAAAAAGAAGTTCAATTCTCTTAAATGCAGAGCCATACCAAACCCTGAAGCCACAGGGGGTTATTTCTAGAATCACCAATAATAATAATAGCCAACAACAAACCCTGCAAATGGAACCAATTACTGATAAGACTAATCTTTCATTTAACTCCTTAACGGATCTTACAATGATGCCAACGGTGATAGGTTCAACAGATTGTTGCATAGAGACTGAGAATGAGACCATTACTTGTTCGTCTTCTTCAAGTTGTTCCACTCCAGACCAAGACGCCTCGCCGGTGGCATCACATTTCCGTTGGAATGACTTCCTTCTAGAAGACGCCTTTGTGCCAACTGCCGATAACAATGATCAAGAAATGGTGAAGGCTGGTTTCTTGTCAAAGGAGTTACTTGTATGCCGAATTGAGAATGTGTCCCGACAAAGTTGGAACAACAAAGAAGCAATAAGCAATGACTTTCAGCTCTCGTCATCATCGTCGTCATCATCTTCCTATGAAACTTCGTTTGTAGAAGCCATGCTTGATCAAGAAAATGAGATGTTTCTGAACTTTCCTCACCTAATGGAGGAACCATCCCACTACTAA 1059 0.4174 MVRSQCYDKISVKRGVWSPEEDAKIVAFVSKHGPSNWTSVPKKAGLKRCGKSCRFRWTNYLRPDLKQDTFTSQEEDLIIKLHAAIGSRWFIIAQQLPGRTDNDVKNYWNTKLKKKLSQMGIDPVTHKPFSKLIADYGNIEGSHSQKPTNQTSFINNKDLKRSSILLNAEPYQTLKPQGVISRITNNNNSQQQTLQMEPITDKTNLSFNSLTDLTMMPTVIGSTDCCIETENETITCSSSSSCSTPDQDASPVASHFRWNDFLLEDAFVPTADNNDQEMVKAGFLSKELLVCRIENVSRQSWNNKEAISNDFQLSSSSSSSSSYETSFVEAMLDQENEMFLNFPHLMEEPSHY* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g2229 352 CDD SANT 69 112 IPR001005 -
Ahy15g2229 352 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Ahy15g2229 352 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Ahy15g2229 352 CDD SANT 17 61 IPR001005 -
Ahy15g2229 352 Gene3D - 68 131 - -
Ahy15g2229 352 Gene3D - 7 67 - -
Ahy15g2229 352 PANTHER F14D16.11-RELATED 1 352 - -
Ahy15g2229 352 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Ahy15g2229 352 Pfam Myb-like DNA-binding domain 69 110 IPR001005 -
Ahy15g2229 352 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Ahy15g2229 352 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 69 116 IPR017930 -
Ahy15g2229 352 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Ahy15g2229 352 SMART sant 13 63 IPR001005 -
Ahy15g2229 352 SMART sant 66 114 IPR001005 -
Ahy15g2229 352 PANTHER F14D16.11-RELATED 1 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g2229 Ahy-Chr15 128669082 128672406 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g2229 1 348 MYB Transcription Factor Family AT3G28470 41.408 1.62e-68 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Ahy15g2229 Myb_DNA-binding 5.60E-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g2229 K09422 - jre:108990168 322.783