Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g2124 ATGTCCATAAACGAGGATGATGTGAATAATGATTCTGATAATGATTTGGGTGATGATTTCGATTATCAACCGAATGCAGAAGACGATGCTGAAGACGACGATGTGGATTCGCTGGATTCTACTAGCAAGAGTGAAGAAGTTTGTGGTGTAAAAAGAATAGCAGATTTAATGGTGGAGGATATTTGGAACCTGGAGTTTAGGACAGAGGATGAGGCATGCCAGTTTTATAACGCTTATTCTTGTTGGCATGGATTTGTAATAAGGAAGGACGACGTGGTTAGGGATAATCAAGGTAGAATCATTAGCAGGCAACTTGTTTGCAACAAAGAGGGCTGGAGGAATATGAGGTATCTCCATCTAGATGATAGATCAAGGGAGGCAAGGTCACTAACGCGAACCAAGTGTCCAGCTCCGCTTAGGGTAAAGCTTGACTACGGCTGCGGTAGATGGAAGGTATCATGTTTTGTCGAATCTCACAACCACGATCTGACGCCACCCCAATTTGCGCATCTGGTTCCGGCCAATCGTCGTCTCACTGTGACTGATAGAGTCCAAGTGGAAAATCTTCATAATTTTGGTGTCAGGACCTGCCATATTATAGGGTATATTGCATTCCAGAAGGGTGGATATCGTCATGCTGGCTTCACACGGAAAGATTTGTACAACCACATCGATCGCTATCGTCGGGCAAAAGTTAAAAACGGGGATGCCAATGCGGCAATAAACTATTTGATTGGCAAGTCAAACAACGATCCGCTGTTCTTTGGAAAGTATACGTTCACTAGTGACGAAAGGCTGGAGCATATTTTTTGGGCAGATGGGCAGTCAATTATCGACTATCACTGCTTTGGAGATATTGTTGCCTTTGATTCAACCTACAAGAAGAATAAATACAACAAGCCTTTGGTCATTTTCTCAGGATGCAATCATCACGGGCAGACTGTTATCTTCGGCTCTGGCCTACTATCCGACGAAACCACAAAGACGTATAAGTGGTTGTTGGAAACCTTTGTTGAAGTGATGGGTGGGAAAAGTCCAAAAGCAATAATAACTGACGGAGACCTTGCCATGCGAGATGCAATCAAGAATGGTCTTATATACGACAACAACGACCAGAGAGACTTTGATCGGAGATGGGCAGCCATTTTGGATAAGCACAACCTTGTTGGCAGTACCTGGATGGAAAAGACGTACGAAACTCGTGAGATGTGGTCCCATTGTTTCCTCCGGGATAAGTTTTTCGGTTACATAAGGACGACATCACAGTGTGAAGGTATAAATTCTCTCATCAGATTTTATGTTAATTGCAAGAACACCCTCATTGACTTCATGCATAACCTGGATAGGGCCTTAAAGGAGTATAGAAACAACGAGTTAATAGCTGACTATAAGTCTCAGTGCTCAGAGCCAGTGATGATTACCTCGTTGGAGGTATATGAAAGATTTGCATCATGTTATTTCACGCGAAACATTTTCAAGGAAATTCGTAATGAGATTCAGAGGGCAGGGGCTTTGAATATAACGGTACTAAGCACAACCTTGGACAAGGTAGAGTTCAGTGTGACTGCTCTCGGAGACCCGGCCAAAGATCGACGGGTGGAAGTCGATAGAGGTAAGAAGCTGTTCTCGTGCTCGTGCAAGCTGTTTGAATCACGTGGTATTCCCTGTAGTCATATCTTTTGTGCCATGAAGTTCGAAAACATACATGAGTTTCCAGATTCGTTGATATACAAAAGGTGGACAAAGAATGCAAAGAACGAATTTATTAGCACAGAAATGCATGTGAATGATGACATCGAAAGGGTCTTAAAGTTTCGAGTTGGAGCATTGGCATCGAATTGCAACAAGCTGTGTGATATTGCTTGCAAGGATCTTGCAGACTTTGATGAAGTCCAGTCTGAACTTGTCAATTTAGTTATCCGCCTGCAGTCACGCAAACAAGGCAAGTCAACTCCTAATGTTAACGTGGAAGACATCAACGATCCATTTGTTGTCAAAAGCAAAGGAGCCCCTTCCAAGAAGTCTTCTTGGAGGAAGAAGAGAGCATGCTCTAATTGCCACAAGTACGGTCATTACTACAAGCGCTGTCCAGATCTGATGCAGCATAGTGTTGAAGGTAACCATCGCGATCGATACCGCAATGCATCAGCCAAGGACTTAGGTTTTAGTCCAGAGAGGTTTGCTAATTCTTCGAGGTCGTTCTCAATTAAGTCCGAACACTACTTAGGACCTAATACCAAGCCTTTTAAAAAGGGTGGAACAAGGAAGTTTACGGCGACGGGTATGAGGAACCGGAAGGGTAAAGACAACACTTTTGTTGAGCGGAGCCTCCATGAAAGCAGCGAATCCATTGACATCGCGTCGACGAATGGTGTTTTCAATAAAAATCTCTACTCGTTAACACAGGTGAAGGAGTCACAGCAGGACAAGAGACATTCATTCACGAAATATGAATGCGTTAATGATGTCGTTGATGATAAATGTGACACACGACATGTGCAGATCGATGTCTGA 2514 0.434 MSINEDDVNNDSDNDLGDDFDYQPNAEDDAEDDDVDSLDSTSKSEEVCGVKRIADLMVEDIWNLEFRTEDEACQFYNAYSCWHGFVIRKDDVVRDNQGRIISRQLVCNKEGWRNMRYLHLDDRSREARSLTRTKCPAPLRVKLDYGCGRWKVSCFVESHNHDLTPPQFAHLVPANRRLTVTDRVQVENLHNFGVRTCHIIGYIAFQKGGYRHAGFTRKDLYNHIDRYRRAKVKNGDANAAINYLIGKSNNDPLFFGKYTFTSDERLEHIFWADGQSIIDYHCFGDIVAFDSTYKKNKYNKPLVIFSGCNHHGQTVIFGSGLLSDETTKTYKWLLETFVEVMGGKSPKAIITDGDLAMRDAIKNGLIYDNNDQRDFDRRWAAILDKHNLVGSTWMEKTYETREMWSHCFLRDKFFGYIRTTSQCEGINSLIRFYVNCKNTLIDFMHNLDRALKEYRNNELIADYKSQCSEPVMITSLEVYERFASCYFTRNIFKEIRNEIQRAGALNITVLSTTLDKVEFSVTALGDPAKDRRVEVDRGKKLFSCSCKLFESRGIPCSHIFCAMKFENIHEFPDSLIYKRWTKNAKNEFISTEMHVNDDIERVLKFRVGALASNCNKLCDIACKDLADFDEVQSELVNLVIRLQSRKQGKSTPNVNVEDINDPFVVKSKGAPSKKSSWRKKRACSNCHKYGHYYKRCPDLMQHSVEGNHRDRYRNASAKDLGFSPERFANSSRSFSIKSEHYLGPNTKPFKKGGTRKFTATGMRNRKGKDNTFVERSLHESSESIDIASTNGVFNKNLYSLTQVKESQQDKRHSFTKYECVNDVVDDKCDTRHVQIDV* 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g2124 837 MobiDBLite consensus disorder prediction 1 42 - -
Ahy15g2124 837 SMART 26again6 542 569 IPR006564 GO:0008270
Ahy15g2124 837 ProSiteProfiles Zinc finger CCHC-type profile. 683 698 IPR001878 GO:0003676|GO:0008270
Ahy15g2124 837 Pfam FAR1 DNA-binding domain 74 164 IPR004330 -
Ahy15g2124 837 ProSiteProfiles Zinc finger SWIM-type profile. 531 567 IPR007527 GO:0008270
Ahy15g2124 837 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 366 639 IPR031052 GO:0006355
Ahy15g2124 837 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 57 362 IPR031052 GO:0006355
Ahy15g2124 837 SUPERFAMILY Retrovirus zinc finger-like domains 669 701 IPR036875 GO:0003676|GO:0008270
Ahy15g2124 837 PANTHER OS03G0181600 PROTEIN 366 639 - -
Ahy15g2124 837 PANTHER OS03G0181600 PROTEIN 57 362 - -
Ahy15g2124 837 MobiDBLite consensus disorder prediction 1 39 - -
Ahy15g2124 837 Pfam MULE transposase domain 286 363 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g2124 Ahy-Chr15 122468974 122471889 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy15g2124 FAR1 1.80E-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g2124 - - ahf:112755379 1514.21