Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g2113 ATGTCCATAAAGGAGGATGATGTTAAGAATAATTCTGATAATGATTTGGGTGATGATTTCGATTATCAACCGAATGCAGAAGATGATGCTGATGACGACGATGTGGATTCGCTGGATTCCACTAGCAAGAGTGAAGAAGTTTGTGGTGTAAAAAGAATAGCGGATTTAATGATGGAGGATATTTGGAACCTGGAGTTTAGGACAGAGGATGAGGCTTGCCAATTTTATAACGCTTATTCTTGTTGGCATGGATTTGTAATGAGGAAGGACGACGTGGTTAGGGATAATCAAGGTAGAATCATTAGCAGGCAACTTGTTTGCAACAAAGAGGGCTGGAGAAATATGAGGTATCTTGATATGGATGATAGATCAAGGGAGGCAAGGTCACTAATGCGAACCAAGTGTCCAGCTCGGCTTAGGGTAAAGCTTGACTACGGCTGCGGTAGATGGAAGGTATCATGTTTTGTGGAATCTCACAACCACGATCTGACGCCACCCCAATTTGCGCATCTGGTACCGGCCAATCGTCGTCTAACTGTCACTGATAGAGTCCAAGTGGAAAATCTTCAAAATTTTGGTGTCAAGAGCTGCCATATTATGGGGTATATTGCATTCCAGAAGGATGGATATCGTCATGCTGGCTTCACACGGAAAGATTTGTACAACCACATCGATCGCTATCGTCGGGAAAAAGTTAAAAACGGGGATGCCAATGCGGCAATAAACTATTTGATTGGCAAGTCAAACAACGATCCGCTGTTCTTTGGAAAGTATACGTTCACTAGTGACGAAAGGCTGGAGCATATTTTTTGGGCAGATGGGCAGTCAATTATCGACTATCACTGCTTTAGAGATATTGTTGCCTTTGATTCAACCTACAAGAAGAATAAATACAACAAGCCTTTGGTCATTTTCTCTGGATGCAATCATCACGGGCAGACTGTTATCTTCGGCTCCGGCCTACTATCCGACGAAACCACAGAGACGTATAAGTGGTTGTTGGAAACCTTTGTTGAAGCGATGGGTGGGAAAAGTCCAAAAGCAGTAATAACTGACGGAGACCTTGCCATGCGAGATGCAATCAAGAATGTTCTGCCTGATGCGACCCATCGGTTATGCGGATGGCATCTGCAGAGAAATGCATGTGAAAATATAAAGAATCCTAATTTCCTGCGTGATTTTAAGGGTCTTATATACGACAACAACGACCAGAGAGACTTTGATCTGAGATGGGCAGCCATTTTGGATAAGCACAACCTTGTTGGCAGTACCTGGATGGAAAAGACGTACGAAACTCGTGAGATGTGGTCCCATTGTTTCCTCCGGGATAAGTTTTTCGGTTACATAAGGATGACATCACAGTGTGAAGAACACCCTCATTGA 1383 0.4338 MSIKEDDVKNNSDNDLGDDFDYQPNAEDDADDDDVDSLDSTSKSEEVCGVKRIADLMMEDIWNLEFRTEDEACQFYNAYSCWHGFVMRKDDVVRDNQGRIISRQLVCNKEGWRNMRYLDMDDRSREARSLMRTKCPARLRVKLDYGCGRWKVSCFVESHNHDLTPPQFAHLVPANRRLTVTDRVQVENLQNFGVKSCHIMGYIAFQKDGYRHAGFTRKDLYNHIDRYRREKVKNGDANAAINYLIGKSNNDPLFFGKYTFTSDERLEHIFWADGQSIIDYHCFRDIVAFDSTYKKNKYNKPLVIFSGCNHHGQTVIFGSGLLSDETTETYKWLLETFVEAMGGKSPKAVITDGDLAMRDAIKNVLPDATHRLCGWHLQRNACENIKNPNFLRDFKGLIYDNNDQRDFDLRWAAILDKHNLVGSTWMEKTYETREMWSHCFLRDKFFGYIRMTSQCEEHPH* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g2113 460 Pfam MULE transposase domain 286 380 IPR018289 -
Ahy15g2113 460 MobiDBLite consensus disorder prediction 1 42 - -
Ahy15g2113 460 Pfam FAR1 DNA-binding domain 74 164 IPR004330 -
Ahy15g2113 460 MobiDBLite consensus disorder prediction 1 16 - -
Ahy15g2113 460 PANTHER OS02G0262500 PROTEIN 60 445 - -
Ahy15g2113 460 MobiDBLite consensus disorder prediction 20 39 - -
Ahy15g2113 460 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 60 445 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g2113 Ahy-Chr15 121548897 121550317 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy15g2113 MULE 1.50E-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g2113 - - adu:107460934 919.457