Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g2111 ATGAGACCAGACCTTAACAATTTGCCTGATGACTACAATAGAGATCATGGCAAACAACTCCTCCAAGACACCTTCTCTCCCGGTTGCAGGAAAAAGAAAAGCGGAAAAGAGGAGTGTGGGAAGGTGTATGAGTGTAGATTTTGTTCCCTCAAGTTCTGCAAGTCCCAGGCTCTTGGGGGACACATGAACCGCCACCGCCAAGAGAGGGAAACAGAGACGCTGAACCATGCCCGTCAGCTGGTGTTTCGTAACGATCATCATCAACCTCCACCTCACTTAGGGTATGTTTGTCATTTCCATTATTTCCTTCTTCCTCTCCTTAATTCATCTTTTGAATTCAGATGCTGTCAAGACCCAACTCTCAGATTCCCAAGATACTTCTCTGCGTCATCCACGTCATCAACCGCTGCAGCATCTCATCATCAGCCCTATCTATACGCTTCACCATCCAGGCCACCGCCGGTCTCCTTCCCGGGGGCTCCTCACGATTACTACGTGGACCATGTCCTCAGCACCGCAGAGTCATCAGCAGGAGCAGGAGGAGGCAGTTACACGTGCATAGGTGCACCGGTGGTGGGACAAGCAGGGAAGGAGAGGGAGCAGGAAGGGTCGCTGAATTGGGGAAGATCATCATCAACATCGGGATCACAGCCTCATCATCGTTTGGATCCTCCTTCAGCGATCAATCGGTTTCAAGATGGGTTCTAA 708 0.5056 MRPDLNNLPDDYNRDHGKQLLQDTFSPGCRKKKSGKEECGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNHARQLVFRNDHHQPPPHLGYVCHFHYFLLPLLNSSFEFRCCQDPTLRFPRYFSASSTSSTAAASHHQPYLYASPSRPPPVSFPGAPHDYYVDHVLSTAESSAGAGGGSYTCIGAPVVGQAGKEREQEGSLNWGRSSSTSGSQPHHRLDPPSAINRFQDGF* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g2111 235 PANTHER ZINC FINGER PROTEIN JAGGED 4 204 IPR045320 GO:0003700
Ahy15g2111 235 MobiDBLite consensus disorder prediction 205 220 - -
Ahy15g2111 235 SUPERFAMILY beta-beta-alpha zinc fingers 41 71 IPR036236 -
Ahy15g2111 235 ProSitePatterns Zinc finger C2H2 type domain signature. 45 65 IPR013087 -
Ahy15g2111 235 PANTHER ZINC FINGER PROTEIN JAGGED 4 204 IPR031113 GO:0007275
Ahy15g2111 235 ProSiteProfiles Zinc finger C2H2 type domain profile. 43 70 IPR013087 -
Ahy15g2111 235 MobiDBLite consensus disorder prediction 195 235 - -
Ahy15g2111 235 Gene3D Classic Zinc Finger 17 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g2111 Ahy-Chr15 121501009 121503154 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g2111 4 192 C2H2 Transcription Factor Family AT1G13400 40.758 3.35e-30 109