Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g2093 ATGCAAACTCATCATCACTCTTTCTCATCCTACATATCCTCTTGTGGGAGTAGTAGTACTACTAGTCCCTTCTTGGACAATCCCGAAGATGCCGATGTTGTGCTTCTTGATGACGAAGAAGCCTCCATTTCCCTTTCTCTTGGGCCTCCCGGCCAACATCACAACCCCAAGATCTCTACAACTTCACCACTACTACTGCAACATAACCCTAACTGTGATGATGACCAGAGTGGTGTAACCGTTGCTCTACACATTGGCCTTCCTTCCACAACAACAACAACTGCACCCAACACCACCACCACCATCAGCACCACAACAAGTAAAACTGATAGCCTTCAGGGTCAGTACTGGATCCCTTCCCCTGCACAAATCCTCATTGGTCCCACTCAGTTCTCTTGCACTGTCTGCAACAAAATGTTCAATCGTTTCAACAACATGCAGATGCATATGTGGGGACATGGGTCACAATATAGGAAAGGACCAGAATCATTAAGAGGAGCAAAGCCAGCATCTTCAATGCTGAGGCTACCATGCTATTGTTGCGCGGAAGGTTGCAAGAACAACATAGAGCACCCAAGATCAAGGCCTCTCAAGGATTTCAGGACACTGCAGACTCACTACAAGAGAAAGCATGGCGCCAAGCCCTTCGGCTGCCGCAAGTGCGGTAAGCCCTTCGCCGTCCGAGGAGATTGGAGGACGCACGAGAAGAATTGCGGCAAACTTTGGTTTTGCATATGTGGCTCCGATTTCAAGCACAAGAGATCCCTCAAGGACCATGTCCGCGCTTTCGGCGACGGCCATGCTCCTCATACTGTGGAGAGCTGTGACCAGTTCGTCGATGAAGAAGAAGATGATTATGAACTTGATGATGACGACGACCTAGACTTAGAAGATAATAACAACAATAATAGTAACGGCAATCAAGGTGTTTTCAGTTTCAATTAA 945 0.4762 MQTHHHSFSSYISSCGSSSTTSPFLDNPEDADVVLLDDEEASISLSLGPPGQHHNPKISTTSPLLLQHNPNCDDDQSGVTVALHIGLPSTTTTTAPNTTTTISTTTSKTDSLQGQYWIPSPAQILIGPTQFSCTVCNKMFNRFNNMQMHMWGHGSQYRKGPESLRGAKPASSMLRLPCYCCAEGCKNNIEHPRSRPLKDFRTLQTHYKRKHGAKPFGCRKCGKPFAVRGDWRTHEKNCGKLWFCICGSDFKHKRSLKDHVRAFGDGHAPHTVESCDQFVDEEEDDYELDDDDDLDLEDNNNNNSNGNQGVFSFN* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g2093 314 ProSitePatterns Zinc finger C2H2 type domain signature. 133 153 IPR013087 -
Ahy15g2093 314 Gene3D Classic Zinc Finger 175 263 - -
Ahy15g2093 314 MobiDBLite consensus disorder prediction 299 314 - -
Ahy15g2093 314 MobiDBLite consensus disorder prediction 1 26 - -
Ahy15g2093 314 ProSiteProfiles Zinc finger C2H2 type domain profile. 131 158 IPR013087 -
Ahy15g2093 314 PANTHER ZINC FINGER PROTEIN WIP6 2 303 - -
Ahy15g2093 314 SUPERFAMILY beta-beta-alpha zinc fingers 199 236 IPR036236 -
Ahy15g2093 314 SUPERFAMILY beta-beta-alpha zinc fingers 124 153 IPR036236 -
Ahy15g2093 314 MobiDBLite consensus disorder prediction 288 314 - -
Ahy15g2093 314 PANTHER ZINC FINGER PROTEIN WIP2 2 303 IPR043584 GO:0003700|GO:0010468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g2093 Ahy-Chr15 120911918 120913385 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g2093 36 272 C2H2 Transcription Factor Family AT1G13290 71.545 2.71e-120 346
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Ahy15g2093 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g2093 - - aprc:113870355 426.017