Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g1979 ATGAAAACTCAACACATTCTCCTTGTTGCATTCGGGTTAGTTGAGGGCGAGAACACAGATTTGCAAAAGTTTTTCCTGAGCAACCTTCATCAGCATATGACTCCTCAGCAGGGTATTCTAGTTATCTCCGACCGCCACAATGCAATCAAGGCTTCTTTGGTTGCCGAAGATGCGTATGCAAAAATTGAACATGAACATCAATATTATATGGATATCTTGAAGCGGAAAGACCCGACAATGGTCATCATTGTGTTCAATGTTTACAAGATGGGCTTCGATGACATACTGTCCTTGTATGCGGGTCCTCAGGTTATCCTTGATTCAGACATGATGGATCTTAGAAGAGAAGCTGCTAGTGGCTGCTTATATATCATTGGAATTGTTAAGAGGGGGCTTGAGATGAGTGACAAAGAGAAGTTTGAGCTTGACAGAAAGGAGGATCCCATGAATTATTCCACCGGAATGGCCTCGGATCGGAGATTCGGAGGTTCCAATCTTCTGAATTCATCTGTGGGTTTGGCTGGCAGAGGGGATCTAAATGGTTCCTCTTCATGTTCCTCTGCTTCCCTAGTGGACTCCTTTGGCCCAAACTTCTGGGACACTCCGACGAATTCCCAGAACTTGGGGTTTTGTGGCATCAATGTTCACAACAGTGGGAGCTCTTTGAACCCAATTGAAATCAGAAAAGATGGGTTTGGATTTGGAAGAGGTGGTCATGATCATGGAACACTTGAAATGGGTTGGAATCAAGGTAATGGCTTTATACCAAATGAGTCTGCAATGTTCCCCCAGAACTTGTCTCGGTTTCCAAGTGATTCTGGATTTATTGAGCGTGCAACGAGATTCTCGTGCTTTGGTGGAGGGGATTTCGGAGATATGGTGAATGCTTATGGGATTCCTCAATCCATGGGCCCTTATGCTGGTACCGGTGGTGAGGCAATTCACCAAGCAAGAGATGGAGGACAACCTCAAGAGAGCAATCCGAATGAAGCTGAAGCTGTGAAAGATGCGACACCATCTGTCGAGTATCTTGCTACTAAAGCTAGCCCGCTCAAGAATGATAAAAGAAGTGAAAACCATGTAATGCCTCAAAATGAAGGGCAACAAGGTCCTTCTAGGCCTCCGAATGAGACTGACCGAGCCAAATCTAGCGATGATGGCGGTGTTCAAGATGACTCCCCAATGTTGGATGGTGTTAGCGACGAACCTTGTCTTAAAGGACTAGATTCAAAGAAAAGGAAAAGAATTGGGCAGGATGCCGATAATGATAAAGCTGTTGAACTACCTACGGAAGGTGCAGGGGATATCTCTGAGAGCCAACAAAAGGGAGAGCAGGAACCTACTCCAACAAACAAGGCTTCTGGAAAGAATGCCAAACAAGGGACTCAAGTTTCAGATCCACCTAAGGAGGAATACATACATGTCAGGGCTCGGCGGGGTCAAGCAACTAATAGCCACAGCCTTGCAGAGAGAGTGAGGAGGGAAAAGATAAGTGAAAGGATGAAGTTTCTTCAAGACCTTGTACCTGGATGCAGCAAGGTTACTGGCAAGGCTGTTATGCTCGATGAAATAATTAACTATGTACAGTCGCTTCAACGACAGGTTGAGTTCTTGTCCATGAAACTCGCAACTGTAAATCCGCGGCTGGATTTTGATATTGAAGGACTTATCCCTAAAGATATTCTTCACCAACGGCCGGGTCCTTCTGCATTGGGGTTTCCTTTAGAAATGTCTATGGCTTTCGCTCCACTACACCCATCACAACCGGGACTAATTCAGCCAACTCTTCCTAGCATGGCCAACTCTTCTGATATCCTTCGGAGAACCGTTCATCCACAGTTGGCATCACCCGCTAGTGGAAGTTTCAAGGAGCCAAATCAGGTTCCTGATGTGTGGGAAGATGAGCTTCACAATGTTGTACAGATGAGCTTTGCTACTACAACTGCTCCCATGAGTACCCAAGATGCGGATGGTACTGTGGCAGCAACTCAGATGAAGGTTGAACTTTGA 2010 0.4572 MKTQHILLVAFGLVEGENTDLQKFFLSNLHQHMTPQQGILVISDRHNAIKASLVAEDAYAKIEHEHQYYMDILKRKDPTMVIIVFNVYKMGFDDILSLYAGPQVILDSDMMDLRREAASGCLYIIGIVKRGLEMSDKEKFELDRKEDPMNYSTGMASDRRFGGSNLLNSSVGLAGRGDLNGSSSCSSASLVDSFGPNFWDTPTNSQNLGFCGINVHNSGSSLNPIEIRKDGFGFGRGGHDHGTLEMGWNQGNGFIPNESAMFPQNLSRFPSDSGFIERATRFSCFGGGDFGDMVNAYGIPQSMGPYAGTGGEAIHQARDGGQPQESNPNEAEAVKDATPSVEYLATKASPLKNDKRSENHVMPQNEGQQGPSRPPNETDRAKSSDDGGVQDDSPMLDGVSDEPCLKGLDSKKRKRIGQDADNDKAVELPTEGAGDISESQQKGEQEPTPTNKASGKNAKQGTQVSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFDIEGLIPKDILHQRPGPSALGFPLEMSMAFAPLHPSQPGLIQPTLPSMANSSDILRRTVHPQLASPASGSFKEPNQVPDVWEDELHNVVQMSFATTTAPMSTQDADGTVAATQMKVEL* 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g1979 669 Pfam Helix-loop-helix DNA-binding domain 484 532 IPR011598 GO:0046983
Ahy15g1979 669 Gene3D - 478 550 IPR036638 GO:0046983
Ahy15g1979 669 MobiDBLite consensus disorder prediction 404 428 - -
Ahy15g1979 669 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 481 531 IPR011598 GO:0046983
Ahy15g1979 669 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 479 549 IPR036638 GO:0046983
Ahy15g1979 669 MobiDBLite consensus disorder prediction 307 469 - -
Ahy15g1979 669 CDD bHLH_AtBPE_like 471 556 - -
Ahy15g1979 669 MobiDBLite consensus disorder prediction 434 464 - -
Ahy15g1979 669 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 170 668 IPR024097 GO:0006355
Ahy15g1979 669 MobiDBLite consensus disorder prediction 362 377 - -
Ahy15g1979 669 PANTHER BHLH TRANSCRIPTION FACTOR 170 668 - -
Ahy15g1979 669 SMART finulus 487 537 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g1979 Ahy-Chr15 106589665 106597548 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g1979 132 668 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68920 41.293 1.12e-103 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy15g1979 HLH 9.20E-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g1979 - - aip:107643749 1340.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g1979 15 106589665 106597548 Ahy15g1979 15 106589665 106597548 ECH