Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g1942 ATGAGGGTAGGGAAAGGGAACCAAGAAGAGGAAGAGTACGACGAAGAGGAATTCGGTTCTTCTAAGAAACAAGGCCCTTCCTCTGCCCCTAATAACGCCAATAACACCAACAAAGATGCCAAAGCTGTTGATAAAGCAAGCGTGATAAGATCAAAACATTCGGTGACTGAGCAGCGAAGAAGAAGCAAGATAAATGAGAGATTTCAGATATTGAGGGATCTCATACCTCATAGTGATCAAAAGAGGGACACAGCATCATTCTTACTGGAGGTGATTGAGTATGTTCAGTACTTACAGGAGAAGGTACAAAAGTATGAAGGCTCATATCAAGGTTGGGGTCATGAACCCTCAAAGTTGATGCCATGGAGAAATAGCCATTGGCGTGTGCAAAGCTTTGTTGGGCAACCTCAAGCCATAAAGAATGGTTCAGGTCCGGTGTCACCTTTTCCTGGAAAGTTTGACGAAAGCAACATTAGTATCTCTCCAACTATGCTTAGCGGCAACCAGAATATGATAGACACCGATCAGGGTAGGGATATTGTCAGCAAAGCATCCGAAGGACAAACTGATTTAGCTAGCAAGGGAATAGCTCTGCCCTTGGGTATGCACCCAAACATGTCTGTTCCTGTCAGAAGCGATGGTGTACTTTCACATCCTCTACAGGGATCTGTTTCAGAAGCGCAGTCAACTGAGTGCCCTGCCGCTAGTGAACCACTGAGCCAACAGGACGAGCTGACTATTGAAGGAGGGACAATCAGCATTTCTAGTGTGTACTCCCAAGGGTTGTTGAACAATCTGACTCAGGCACTACAGAGTGCTGGTTTAGATCTATCACAGGCCAGCATTTCGGTTCAGATTAATCTTGGAAAACGAGCAAACAATGGACCAAGCTGTGGGACCTCTTCTCCCAAGAATCACGACATGGTTCCTTCCAGCAACCAAGCTTTTGCACAGTTTAGAGATGCAGGCAGTGAAGACTCGGACCAAGCTCAGAAACGTCTGAAAACATTCAAGTGA 1017 0.4572 MRVGKGNQEEEEYDEEEFGSSKKQGPSSAPNNANNTNKDAKAVDKASVIRSKHSVTEQRRRSKINERFQILRDLIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEGSYQGWGHEPSKLMPWRNSHWRVQSFVGQPQAIKNGSGPVSPFPGKFDESNISISPTMLSGNQNMIDTDQGRDIVSKASEGQTDLASKGIALPLGMHPNMSVPVRSDGVLSHPLQGSVSEAQSTECPAASEPLSQQDELTIEGGTISISSVYSQGLLNNLTQALQSAGLDLSQASISVQINLGKRANNGPSCGTSSPKNHDMVPSSNQAFAQFRDAGSEDSDQAQKRLKTFK* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g1942 338 PANTHER BES1-INTERACTING MYC-LIKE PROTEIN 1 336 IPR044295 GO:0003700|GO:0006351|GO:0046983
Ahy15g1942 338 MobiDBLite consensus disorder prediction 43 61 - -
Ahy15g1942 338 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 48 98 IPR011598 GO:0046983
Ahy15g1942 338 CDD bHLH_AtBIM_like 47 123 - -
Ahy15g1942 338 Gene3D - 45 117 IPR036638 GO:0046983
Ahy15g1942 338 MobiDBLite consensus disorder prediction 218 239 - -
Ahy15g1942 338 MobiDBLite consensus disorder prediction 209 239 - -
Ahy15g1942 338 MobiDBLite consensus disorder prediction 290 338 - -
Ahy15g1942 338 MobiDBLite consensus disorder prediction 290 320 - -
Ahy15g1942 338 SMART finulus 54 104 IPR011598 GO:0046983
Ahy15g1942 338 Pfam Helix-loop-helix DNA-binding domain 50 99 IPR011598 GO:0046983
Ahy15g1942 338 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 49 119 IPR036638 GO:0046983
Ahy15g1942 338 MobiDBLite consensus disorder prediction 22 41 - -
Ahy15g1942 338 MobiDBLite consensus disorder prediction 1 61 - -
Ahy15g1942 338 PANTHER TRANSCRIPTION FACTOR BIM2 1 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g1942 Ahy-Chr15 99805694 99811854 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g1942 1 305 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G69010 59.016 7.25e-118 341
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy15g1942 HLH 1.90E-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g1942 - - gmx:100816055 538.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g1942 15 99805694 99811854 Ahy15g1942 15 99805694 99811854 ECH