Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g1899 ATGAACCAGCAGGACGAGAAAGCCACCATGGATCTTGTTCCACCCTCTGAGCACCTCTGTTACGTTCGTTGCAACTTCTGCAACACTGTGCTTGCGGTTGGGATACCATGCAAGAGGCTGCTGGATACTGTGACAGTGAAGTGTGGTCACTGCAGCAACCTCTCGTTTCTGAGCACCAGGCCCCCTCCACCTCCAGCCCCTTTCTCTCACACCCATCAAACCACCACCATTGATCACACCCTCACTCTCCAGGGTTTCTATGGTGATTCGAAGAAGGGGCAAGGATCATCTTCATCGTCCTCACCAACTACATCAAACGAATCAGTCTCCCCTAAAGCAGCACCTTTTGTTGTCAAACCACCTGAGAAGAAGCACCGTCTTCCATCTGCATACAACCGTTTCATGAAAGAGGAGATTCAGCGCATCAAAGCAGCCAACCCTGAGATCCCACATCGAGAAGCTTTCAGCGCTGCAGCCAAAAATTGGGCAAGGTTTATTCCAAATTCGCCTGCAAGCTCAGTTGCTGCAAGTAAAAACAATGAATGA 546 0.5 MNQQDEKATMDLVPPSEHLCYVRCNFCNTVLAVGIPCKRLLDTVTVKCGHCSNLSFLSTRPPPPPAPFSHTHQTTTIDHTLTLQGFYGDSKKGQGSSSSSSPTTSNESVSPKAAPFVVKPPEKKHRLPSAYNRFMKEEIQRIKAANPEIPHREAFSAAAKNWARFIPNSPASSVAASKNNE* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g1899 181 MobiDBLite consensus disorder prediction 85 124 - -
Ahy15g1899 181 CDD HMGB-UBF_HMG-box 126 162 - -
Ahy15g1899 181 PANTHER PROTEIN YABBY 6-RELATED 8 180 IPR006780 GO:0007275
Ahy15g1899 181 SUPERFAMILY HMG-box 110 163 IPR036910 -
Ahy15g1899 181 MobiDBLite consensus disorder prediction 85 111 - -
Ahy15g1899 181 Pfam YABBY protein 15 165 IPR006780 GO:0007275
Ahy15g1899 181 PANTHER PROTEIN CRABS CLAW 8 180 - -
Ahy15g1899 181 Gene3D High mobility group box domain 104 171 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g1899 Ahy-Chr15 86119881 86122216 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g1899 5 179 C2C2-YABBY Transcription Factor Family AT1G69180 61.236 4.57e-64 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Ahy15g1899 YABBY 1.40E-57 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g1899 K25796 - gmx:100819079 273.092
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g1899 15 86119881 86122216 Ahy15g1899 15 86119881 86122216 ECH