Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g1898 ATGAAAGCAATCCAATTCCATGTGCCTAGGTTGTACTATGACACATTTCATCCCACAATCCACTTCCAGATACCATCATCATCATTATCACTCCCTAAACCAATGATCTCCCGCTACAGCATAGTCCAATCTCACCACCCCAACTTCACAATCTCATACCTGATTGACTCATGTGGTCTCTCTCCAGACACTACTGCTCTTACTTCCCAAAATCTTCACCTTCCTTCTGCTGAAAGACCAGACTCAATTCTCACCCTTCTCAGGGAGCATGGTTTCACAGATACCCAGATTTCAAACCTCATCAGAAAACGCCCATTGCTCCTCTTAGTAAACCCAGATATCCTCTTGCCAAAGTTTCAATTTTTCCTCTCCATTGGGATTTCCAATACCAACCTCGCAAGAACCCTAACCGCTGACCCAACCCTTTTGACCCGGAGCTTGGAGAAACAGATCATACCCTCTTACAATTTTCTCAAGAGTGTGTTGATTTCTGATGAAAAGGTTGCAGCTTCATTGAAGCGCACATCTTGGGTCTTCCTCGAGGATCACAAGAAGAACCTCGTACCAAACCTCAATCTCCTAAAAGAGATGGATGTTCCTGAATCATGTGTTATGCTGTTGCTTACTCATTTCCCAGAGGCATTGATGAAGAAAAAGGAAAACTTTGCAAAGCTTTCTAAGGAGATTAAAGAAATGGGATTTAATCCAAAAAAGACAACATTTGTGTTGGCCATTCATGTGCTCTCAGGTGAGGGTAACAAATCCATATATAACCGCTGTTACGAGGTTTATAAGAGGTGGGGTTGGTCAGATGATGACATCCTTATGGCATTCAAGAAGCACCCACTTTGTATGATACTTTCAGAGGATAAGATAATGAAGACAATGGATTACTTGGTGAATAAGATGGGTTGGACTTCAGGGATGATTGTTAGGTGCCCAGTTGTGTTGTTTTTCAGCTTGGAGAAGAGGATTAAACCTAGGTGCTCTGTTGCTAAGGTTTTGTTGATGAAGGGATTGATTAAGAGGAAGTTGAGCTTGTCCACTTTGCTGTTGCCTGATGAGGACAGTTTCTTAGAGAAGCATGTGATCAAGTATGAGCTGCAGGTGAAGGGTGGTGGAACAAGGATTCAACGATGCTCCTGTTTGATCAACGCAACAGATCTGGGAAGGTAA 1176 0.4277 MKAIQFHVPRLYYDTFHPTIHFQIPSSSLSLPKPMISRYSIVQSHHPNFTISYLIDSCGLSPDTTALTSQNLHLPSAERPDSILTLLREHGFTDTQISNLIRKRPLLLLVNPDILLPKFQFFLSIGISNTNLARTLTADPTLLTRSLEKQIIPSYNFLKSVLISDEKVAASLKRTSWVFLEDHKKNLVPNLNLLKEMDVPESCVMLLLTHFPEALMKKKENFAKLSKEIKEMGFNPKKTTFVLAIHVLSGEGNKSIYNRCYEVYKRWGWSDDDILMAFKKHPLCMILSEDKIMKTMDYLVNKMGWTSGMIVRCPVVLFFSLEKRIKPRCSVAKVLLMKGLIKRKLSLSTLLLPDEDSFLEKHVIKYELQVKGGGTRIQRCSCLINATDLGR* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g1898 391 Pfam mTERF 84 236 IPR003690 GO:0003690|GO:0006355
Ahy15g1898 391 Pfam mTERF 211 358 IPR003690 GO:0003690|GO:0006355
Ahy15g1898 391 PANTHER CGI-12 PROTEIN-RELATED 30 370 IPR003690 GO:0003690|GO:0006355
Ahy15g1898 391 Gene3D Transcription termination factor 3, mitochondrial 145 369 IPR038538 -
Ahy15g1898 391 SMART mt_12 307 338 IPR003690 GO:0003690|GO:0006355
Ahy15g1898 391 SMART mt_12 133 164 IPR003690 GO:0003690|GO:0006355
Ahy15g1898 391 SMART mt_12 169 200 IPR003690 GO:0003690|GO:0006355
Ahy15g1898 391 SMART mt_12 205 235 IPR003690 GO:0003690|GO:0006355
Ahy15g1898 391 SMART mt_12 275 306 IPR003690 GO:0003690|GO:0006355
Ahy15g1898 391 SMART mt_12 98 128 IPR003690 GO:0003690|GO:0006355
Ahy15g1898 391 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 30 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g1898 Ahy-Chr15 85369621 85370796 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Ahy15g1898 mTERF 7.70E-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g1898 K15032 - ahf:112805356 476.478