Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g1882 ATGGTCTATGGTCACAGTTTTGGAGGGTGGCCTAAAGGTGTCTATGGTCACGCCCCCATTGTCGCCGCCGTCGGAAGCTTGTTGGCGCCGCCGCCGTCCCAAGCTCTAAGGACATCGTCTTTATCTTCCTTGGCTTCTCCGTTCGTCGAAGATCTCTCCTTACACCTTCTCCGCCGTCGCCATCGGCGTCTCCATCGGTGTCTCCGTTCTCATTGCTGCTTGGGGGAATTACGTGCTGCAATCAAGGCTCCCCGAATCACTTCCACGAATCTCATTAGTGTTAGAGGAACTATCGAAAGGTATAAGAAAGCAAGTGCTGCTTCCTCAAACACAGAATCTGTATCTGAAGCTAATACACAGTTTTATCAGCAAGAATCATCCAAATTAAGAAGACAGATTCGTGATATTCAAAATCTAAATAGGCACATCCTTGGTGAAGCTCTTAGCTCTCTGAGCCTCAAGGAACTAAAGAACCTTGAGAGTAGATTGGAGAAAGGTTTAAGCAGAGTTCGATCTAGAAAGAAGGATATGATGTGA 537 0.4711 MVYGHSFGGWPKGVYGHAPIVAAVGSLLAPPPSQALRTSSLSSLASPFVEDLSLHLLRRRHRRLHRCLRSHCCLGELRAAIKAPRITSTNLISVRGTIERYKKASAASSNTESVSEANTQFYQQESSKLRRQIRDIQNLNRHILGEALSSLSLKELKNLESRLEKGLSRVRSRKKDMM* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g1882 178 PANTHER SERUM RESPONSE FACTOR HOMOLOG 92 177 - -
Ahy15g1882 178 Coils Coil 153 173 - -
Ahy15g1882 178 ProSiteProfiles K-box domain profile. 119 178 IPR002487 GO:0003700|GO:0005634|GO:0006355
Ahy15g1882 178 Pfam K-box region 117 178 IPR002487 GO:0003700|GO:0005634|GO:0006355
Ahy15g1882 178 PANTHER MADS-BOX TRANSCRIPTION FACTOR ARLEQUIN 92 177 - -
Ahy15g1882 178 Coils Coil 122 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g1882 Ahy-Chr15 77850197 77853334 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g1882 93 178 MADS-box Gene Family AT2G42830 75.581 1.65e-40 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g1882 K09264 - ahf:112748212 240.35