Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g1834 ATGGCAAATCTGAATGAGAATGAACAACCTAGAAGAATGCTTGGCTCTTACACTGCTCCGAATGCAGATCTTTATGGAAAAATCATTGTGGTACCTCTTATAGCTGCAAACAAATTTGAACTGAAGCCTCACTCTGAATACCCTAACACTCGGACAGAGCTCATCTACGGCGCTTGCACTCTCTCATCTGTTGGGGCTCCCTCCATCATCTCCCCTAACCTGTCTCTGCTGGCGCTCGCACTCCCTCGGCGCTCACTACTCACCGCGTCGGTTAGCCAACGGAGGTCGCCTTTCCTTCCTCCGTGCCGCCAGTCTCTGCCTTCCTTCCTCGATCGTCTATTCTCATCTGCTCTACCGCCTTCGCTCCTTGTGTGCTCCACTTCACTCTCTGAACGGTGGAAGTTTCGGTTTGGTGAACGAGGACCTTCTCCAGAACATTCTGGCGAGGCTCTGGCTCGTTGGTTCGCTTCCGCTGCTTGCGTCAGCAAATCATGGAGCTTTGTCTGCAATCGAATCCTTACTCGTCCAAAGCTCTCTTTTGCTCTTTCTCTCAATCCTTCACTTTCCTATGGTAAAGATTATGAGTTTGATGCTCCAGTGAAGCTCCTAGAGAAACATCTACATGCTATGGCACAATCTGTTGTTGAGCAACTTGTTGTTTCTCAGGTTCTCGTGTCTGACATTAAGATTGGATATAAGATAGTTAACACTCAGGTTCTTGCTTTCAATGGTAAGCCTGTGAAGAATTTGAAGGGCTTGGCCACCATGGTTGAGAACTGTGATGATGAGTCTCTAAAGTTTGATCTGGAATACCAACAGGCTGATAAGCTTTTGTCCCTAGAATTCCAACCTTCTATAGTTTTTATTAATTTTGATTTTCCCAAGAATTCAAAAACTTATCTCCACAAGGTCGGTCGCTCAGGGAGGTTTGGGCATCTTGGTTTAGCAGTTACCTTGATCACTTATTGGGACCGCTTTAATTTGATTGAACAAGAATTTGGAATTGAAATAAAGCAAATTCCACCACACATTGACCAGATTATTCGTGAAGTGTATTGTGGAGCTTTCCATTTGGTTCCTTTATCCGAGGAAGGCCTGGTATAA 1104 0.4538 MANLNENEQPRRMLGSYTAPNADLYGKIIVVPLIAANKFELKPHSEYPNTRTELIYGACTLSSVGAPSIISPNLSLLALALPRRSLLTASVSQRRSPFLPPCRQSLPSFLDRLFSSALPPSLLVCSTSLSERWKFRFGERGPSPEHSGEALARWFASAACVSKSWSFVCNRILTRPKLSFALSLNPSLSYGKDYEFDAPVKLLEKHLHAMAQSVVEQLVVSQVLVSDIKIGYKIVNTQVLAFNGKPVKNLKGLATMVENCDDESLKFDLEYQQADKLLSLEFQPSIVFINFDFPKNSKTYLHKVGRSGRFGHLGLAVTLITYWDRFNLIEQEFGIEIKQIPPHIDQIIREVYCGAFHLVPLSEEGLV* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g1834 367 PANTHER - 189 274 - -
Ahy15g1834 367 PANTHER DEGP PROTEASE 9-RELATED 189 274 - -
Ahy15g1834 367 Pfam PDZ domain 186 272 IPR041517 -
Ahy15g1834 367 Gene3D - 289 353 IPR027417 -
Ahy15g1834 367 Gene3D - 178 288 IPR046449 -
Ahy15g1834 367 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 288 343 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g1834 Ahy-Chr15 69837237 69844858 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g1834 287 345 Eukaryotic Initiation Factors Gene Family AT5G11170 41.935 7.40e-12 63.9