Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g1823 ATGGGTCAAGAATTTTCTCATGAAGGGGTTAATAGCGAGCATACATCATATGATCAGTATGAGCAGGAGGAAGAAAAATATGAGGAAGTTGACGTGGATTATATGGATGAGGACGACACAAGTGTGGAACTAATGTTCGATTATCACGGCTTCGATGAAGGGTATAACATTGACTCACTTGAAGACATTGGGATGATTGAATTTTGGAACATCAGGGATGAAGATGTATGTCATTTTCACTTTTCTGATGTCGACATTGCATTTGAGTTCTACAATAGATATGCAAGGACAAGAGGCTTTAGTGCTCGGAAGAACAGGAGTAGGAAGAGTCGTGCGGGCGCACTTAAGTTGAAGAATTTTGTATGTCATCGTGAAGGATTTAGACTACAAAATAGTTACTGCATTGGAAACCTTAAGAGAAAACCTACACCCGAGACAAGGTGTGGCTGCAGTGCACTGATGGAGATTCGTGTAGATGCACCTAGTGGTCGTTGGTTTATTTCCTATTTTTTTGATGAACACAATCATCCGCTTCTGGATCCTCGGTTGACTGGATTGCTCCCTAGGCATAGATTCATGTCCGAGGCTGATATTGGCCACATGGTTAACATGAAAAAGGGTGGGATTAGTGTTGGGCAGATATATCGGGCATTAGCAAATCAGGCAGGTGGCTACGAGTATCTCTCTTTCACGCAAAGGGACATGTACAATAAAATAGCAAAGCAGAGGCGCCAATTACCCGGTGATGCATATGCAGCTTTGAAGTATCTAGAAGATCAAGCAACAAATGACCCTTCTCTCTATTTTAATCATCACATGGATGCCGATGGTACTTTGCGCAATTTATTCTGGTGTGATGGCCTTAGTAGGGTAGACTACTCATTATTTGGCGATGTGCTGGCTTTTGATGCTACCTATAAGAGGAATAAATATATGTGTCCACTGGTGGTATTTTCTGGTGTCAATCATCACAATCAAACAATTATCTTTGCTGCTGCTTTAATTTGCGATGAGGAAAAAGACACATATAGGTGGTTGCTACAACAACTGAAAGTGGCAATGAATGGGAAAGCACCTGTTTCGGTGATCACAGATGGTGATTTATCAATGAAGTTCGCCATTGAGAAAGAGTTTCCTAATGCACATCATAGATTATGTGCATGGCATCTGATTCGCAATGCAACAAGTAACATTGGCAAGCCCCAGTTTACCTCCATGTTTAAAAAGTGTATGCTAGGCGACTATGAAATTGATGTATTTCGTCAAAAGTGGTTTGAAATGGTTGAGGAATTTGGTGTCGAAAACAAGAATTGGGTCCTAGATATGTATAAAAAGAGACATTCATGGGCAACTGCACATATAAGAGGGAAGTTTTTTGCTGGTTTCCGGACTACTTCTCGGTGCGAGGGATTAAACTCGATCATTGCAAAGTATGTCAACTCAAGGTACAATCTGGTTGAGTTCATTCAACACTTTAATCGTTGTGTCGACCATATAAGGTGGAAAGAGGTCCAGGCTGACCTCGCCTCTGTGAATGGGAGACCCAGTTTGCAAACCTGTTTTCAACAGTTAGAGAGGAGTGCTGCCAATGTTTACACCCTATCAATATTTCATATGTTCCAACCAATCCTTGTACGGGCTGCATCAATGAAGGTAATAAATATGAGGCAAACTGGCTCTTATGTGATTTACTCTGTCGCTTTAGACCGAACGCCAAATGAGACGTGGCGTGTATTCTGTTGTGACATTGAGATGGAATTCAATTGTTCATGTATGAGAATGGAATCATTTGGCATACCTTGTGAACACATAATTTGTGTCTTGGTGCATGAAGATATAGAGGAGTTGCCAAGGTCATTAGTCTTGCCTCGGTGGACCAAGACTGCCAAAGTTAGTTTCCAAAATGCTCGAGGGCTTCATTGGGATTCTTTGATGCTAAGTCAATACGGTTGTTTGATGGATTGGTTTAGACAACTAGCTAACTTTGCTTGTCGAGATAACGAGAGATTTATCTTTATACGGGAAATGGCTATGAATTTGTTGAAACAATTTAAGGAGGAAGATGCTGCACAAAAAGAGTTGGTCAATGATGCAGATAGTGTAAGAGATGGTGTGCAAGTGGATAATTCTGGAGCTGGGCTCGCAACCAATGATCTCGGACATAGCATGCCAAGGGACCCAAGAAAATGTAGGACAAAAGGGGGGGCTTCACAGTTCAATAAAAGAAAACATCGATGTGGACAGTGTGGCATGGAGGGCCACAATCGAACAACTTGTCGTGTTCGTCGTGGCATCTCACAGTCAGAAGGCTGGGGAAATGACTCGGATGATCACATGAACATTGAAGATGACTCATTGGTATATGATGAGAATGCTTCGTACAGTAGCAACGAAGTGATCCTATATTATGCTAGATTCTTTGCTGTGGAGCATAAAGGTGCCGGATTATTCTCAAGGAAATGTGGTGAATATTTATTTGTTCTTCTTAGAGGCCATAAGAATGGACGAGAGGCTGTCAAGTACTTTGGACCAGCACCTGGTGTGCCCCATAGTCACACCAAGCCCTATTTCATTTTTAGTTCAGTTTTCCTTCCCTCAAAGGGGAAAAAGGATTGGAACTCGCTCAACAATTTTGGTTTAGTTGCTACCGTTTTATTGAAAACCATGAAAGGATTGATGAGTAGAAATTCTTCATTTGTTCGTGATCGTTAA 2712 0.4156 MGQEFSHEGVNSEHTSYDQYEQEEEKYEEVDVDYMDEDDTSVELMFDYHGFDEGYNIDSLEDIGMIEFWNIRDEDVCHFHFSDVDIAFEFYNRYARTRGFSARKNRSRKSRAGALKLKNFVCHREGFRLQNSYCIGNLKRKPTPETRCGCSALMEIRVDAPSGRWFISYFFDEHNHPLLDPRLTGLLPRHRFMSEADIGHMVNMKKGGISVGQIYRALANQAGGYEYLSFTQRDMYNKIAKQRRQLPGDAYAALKYLEDQATNDPSLYFNHHMDADGTLRNLFWCDGLSRVDYSLFGDVLAFDATYKRNKYMCPLVVFSGVNHHNQTIIFAAALICDEEKDTYRWLLQQLKVAMNGKAPVSVITDGDLSMKFAIEKEFPNAHHRLCAWHLIRNATSNIGKPQFTSMFKKCMLGDYEIDVFRQKWFEMVEEFGVENKNWVLDMYKKRHSWATAHIRGKFFAGFRTTSRCEGLNSIIAKYVNSRYNLVEFIQHFNRCVDHIRWKEVQADLASVNGRPSLQTCFQQLERSAANVYTLSIFHMFQPILVRAASMKVINMRQTGSYVIYSVALDRTPNETWRVFCCDIEMEFNCSCMRMESFGIPCEHIICVLVHEDIEELPRSLVLPRWTKTAKVSFQNARGLHWDSLMLSQYGCLMDWFRQLANFACRDNERFIFIREMAMNLLKQFKEEDAAQKELVNDADSVRDGVQVDNSGAGLATNDLGHSMPRDPRKCRTKGGASQFNKRKHRCGQCGMEGHNRTTCRVRRGISQSEGWGNDSDDHMNIEDDSLVYDENASYSSNEVILYYARFFAVEHKGAGLFSRKCGEYLFVLLRGHKNGREAVKYFGPAPGVPHSHTKPYFIFSSVFLPSKGKKDWNSLNNFGLVATVLLKTMKGLMSRNSSFVRDR* 904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g1823 903 Gene3D - 815 864 - -
Ahy15g1823 903 ProSiteProfiles Zinc finger SWIM-type profile. 564 612 IPR007527 GO:0008270
Ahy15g1823 903 MobiDBLite consensus disorder prediction 713 735 - -
Ahy15g1823 903 Pfam MULE transposase domain 299 393 IPR018289 -
Ahy15g1823 903 Pfam Ribosomal protein 60S L18 and 50S L18e 827 857 IPR021131 -
Ahy15g1823 903 Pfam FAR1 DNA-binding domain 89 179 IPR004330 -
Ahy15g1823 903 MobiDBLite consensus disorder prediction 1 16 - -
Ahy15g1823 903 PANTHER OS02G0262500 PROTEIN 77 669 - -
Ahy15g1823 903 SMART 26again6 587 614 IPR006564 GO:0008270
Ahy15g1823 903 MobiDBLite consensus disorder prediction 1 23 - -
Ahy15g1823 903 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 77 669 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g1823 Ahy-Chr15 66319305 66323079 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g1823 827 856 Cytoplasmic Ribosomal Protein Gene Family AT3G05590 86.667 2.24e-12 63.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy15g1823 MULE 9.10E-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g1823 - - aip:110272016 1845.48