Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g1795 ATGGATCTGATTGGTTTGGTCTTGGTCATCAACCTCGCAATGTTCTCCTCCTCCGTGTACGGCTATGGCGGAGGAGGGTGGATTAACGCACATGCTACCTTCTATGGTGGGAGTGATGCTTCAGGAACAATGGGTGGGGCGTGTGGGTATGGGAACCTGTATAGTCAAGGTTATGGAACAAACACAGCAGCTTTGAGCACTGCACTGTTCAACAATGGTTTGAGCTGTGGTTCATGCTATGAGATAAGGTGTGTGAATGACCGTAGGTGGTGCCTACCTGGCTCCGTAATGGTAACTGCCACCAATTTCTGCCCTCCAAACAATGCCTTACCCAATAATGCAGGAGGGTGGTGCAACCCTCCCTTGCACCACTTTGATCTTGCTCAGCCTGTTTTCTTGCGCATTGCGCAATACAGAGCTGGAATTGTCCCTGTTTCTTATAGAAGAGTACCCTGCAGGAGAAGGGGAGGAATAAGGTTCACAATCAATGGCCACTCATACTTCAACCTAGTCTTGGTGACAAACGTTGGCGGCGCCGGCGACGTTCATGGCGTGGCCATTAAGGGTTCAAGAACTGGGTGGATGCCAATGTCAAAAAACTGGGGACAGAATTGGCAGAGCAACAACTACCTCAACGGCCAAAGTCTCTCCTTCAAAGTCACCACCAGTGATGGCCGTAGTGTGGTCTCTTACAATGTTGCCCCAGCTGGATGGTCATTTGGCCAAAGCTACACTGGAGCCCAATTCCATTAA 753 0.5007 MDLIGLVLVINLAMFSSSVYGYGGGGWINAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIRCVNDRRWCLPGSVMVTATNFCPPNNALPNNAGGWCNPPLHHFDLAQPVFLRIAQYRAGIVPVSYRRVPCRRRGGIRFTINGHSYFNLVLVTNVGGAGDVHGVAIKGSRTGWMPMSKNWGQNWQSNNYLNGQSLSFKVTTSDGRSVVSYNVAPAGWSFGQSYTGAQFH* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g1795 250 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 45 157 IPR007112 -
Ahy15g1795 250 Pfam Expansin C-terminal domain 158 235 IPR007117 -
Ahy15g1795 250 Gene3D - 15 153 IPR036908 -
Ahy15g1795 250 SUPERFAMILY Barwin-like endoglucanases 26 175 IPR036908 -
Ahy15g1795 250 SMART dpbb_1 62 147 IPR007112 -
Ahy15g1795 250 Gene3D - 157 250 IPR036749 -
Ahy15g1795 250 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 167 246 IPR007117 -
Ahy15g1795 250 PRINTS Expansin/Lol pI family signature 140 156 IPR007118 GO:0005576
Ahy15g1795 250 PRINTS Expansin/Lol pI family signature 44 62 IPR007118 GO:0005576
Ahy15g1795 250 PRINTS Expansin/Lol pI family signature 66 84 IPR007118 GO:0005576
Ahy15g1795 250 PRINTS Expansin/Lol pI family signature 26 41 IPR007118 GO:0005576
Ahy15g1795 250 PRINTS Expansin/Lol pI family signature 194 208 IPR007118 GO:0005576
Ahy15g1795 250 PRINTS Expansin/Lol pI family signature 232 246 IPR007118 GO:0005576
Ahy15g1795 250 PRINTS Expansin signature 57 71 IPR002963 GO:0009664
Ahy15g1795 250 PRINTS Expansin signature 168 189 IPR002963 GO:0009664
Ahy15g1795 250 PRINTS Expansin signature 203 224 IPR002963 GO:0009664
Ahy15g1795 250 PRINTS Expansin signature 132 145 IPR002963 GO:0009664
Ahy15g1795 250 PRINTS Expansin signature 96 106 IPR002963 GO:0009664
Ahy15g1795 250 PRINTS Expansin signature 156 168 IPR002963 GO:0009664
Ahy15g1795 250 PRINTS Expansin signature 84 95 IPR002963 GO:0009664
Ahy15g1795 250 PRINTS Expansin signature 115 132 IPR002963 GO:0009664
Ahy15g1795 250 PRINTS Expansin signature 232 248 IPR002963 GO:0009664
Ahy15g1795 250 PANTHER EXPANSIN-A15 8 250 IPR002963 GO:0009664
Ahy15g1795 250 SUPERFAMILY PHL pollen allergen 154 246 IPR036749 -
Ahy15g1795 250 PANTHER EXPANSIN 8 250 - -
Ahy15g1795 250 Pfam Lytic transglycolase 62 147 IPR009009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g1795 Ahy-Chr15 61272152 61275262 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g1795 1 250 Expansin Gene Family AT2G03090 80.800 2.29e-150 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g1795 - - gmx:100796316 478.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g1795 15 61272152 61275262 Ahy15g1795 15 61272152 61275262 ECH
Ahy15g1795 15 61272152 61275262 Ahy11g1918 11 124665604 124668075 ECH
Ahy15g1795 15 61272152 61275262 Ahy20g2547 20 133909401 133912168 ECH