Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g1773 ATGGCGATTCATCAACAACATGAACCCACTAGTGTTGTCAGTTTCTTCAAGATCATTTGTCGTTGGCATATTCTAGATGAGAAGATTAAGCTTCCAATGGAATTCACAAACAAGTGTGGATTGAAACTCCCAAATCCAGTTATTCTGAAAGTTGTAGATGGCAACCAAAAGAAAGTGCATTGGACCAAAATTAATGGTTCCATTTGGTTTATTGGGAAGGAATGGAAAGAGTTTCTTGAGAACTACTCTGTCTCACACGGTCACCTTTTGTTGTTCAAATATTGTCTTGTGACTTCATACTTTGGGGTCCAAATATTTGACAGCACCACTCTTGAAATTAACTACCCTTACCATGAACTCAACTATGATGATTATGAAGATTATTATGATGAAGATGATGATGATGATGATGAAGATGTTGATGATGTTGTGAAGCTTCAATATGATCAATATCAATTGAAAGATAAAAGTGAGAGTATTGCGGATGCTATAAGAAGTGACAGACTAGAGAGAAAAGATAGCAACCCCAGTTTCGAGGTTGTCATGCCGGATTCATATATCAATGGGGGAAGATGCATGGCCGTACCTTCTAATTTTGCAAGGGAGTACATGAAAGAAGGAGGATACCTACTAAGAGTGGCGGATGGGAGGACATGGAAAGTGATGTACAAGACTTGGAGTGGAGATGGGATGGCTTGCAAGAAGTACAAACTGCAAAAGGGTTGGGCCAAGTTTAGCCAAGGAAACAAGTTAGAGAAGAATGATGTCTGTGTCTTTGAGCTGGTTAATAACAATTGCAATGGTAGTAGCTCCACCATCATACCAACCTTCAATGTTCTAATCCACCGTAACCACATCGGTAGCAGCTATTGA 873 0.3952 MAIHQQHEPTSVVSFFKIICRWHILDEKIKLPMEFTNKCGLKLPNPVILKVVDGNQKKVHWTKINGSIWFIGKEWKEFLENYSVSHGHLLLFKYCLVTSYFGVQIFDSTTLEINYPYHELNYDDYEDYYDEDDDDDDEDVDDVVKLQYDQYQLKDKSESIADAIRSDRLERKDSNPSFEVVMPDSYINGGRCMAVPSNFAREYMKEGGYLLRVADGRTWKVMYKTWSGDGMACKKYKLQKGWAKFSQGNKLEKNDVCVFELVNNNCNGSSSTIIPTFNVLIHRNHIGSSY* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g1773 290 Pfam B3 DNA binding domain 178 266 IPR003340 GO:0003677
Ahy15g1773 290 Gene3D - 8 110 IPR015300 -
Ahy15g1773 290 SUPERFAMILY DNA-binding pseudobarrel domain 173 266 IPR015300 -
Ahy15g1773 290 ProSiteProfiles B3 DNA-binding domain profile. 178 280 IPR003340 GO:0003677
Ahy15g1773 290 SUPERFAMILY DNA-binding pseudobarrel domain 10 108 IPR015300 -
Ahy15g1773 290 SMART B3_2 178 270 IPR003340 GO:0003677
Ahy15g1773 290 SMART B3_2 15 109 IPR003340 GO:0003677
Ahy15g1773 290 PANTHER B3 DOMAIN-CONTAINING 11 284 - -
Ahy15g1773 290 CDD B3_DNA 176 283 IPR003340 GO:0003677
Ahy15g1773 290 Gene3D - 154 285 IPR015300 -
Ahy15g1773 290 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 11 284 - -
Ahy15g1773 290 CDD B3_DNA 14 107 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g1773 Ahy-Chr15 59461336 59465066 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g1773 3 160 B3 DNA Binding Superfamily AT1G49475 33.728 3.01e-16 73.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Ahy15g1773 B3 1.10E-15 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g1773 - - ahf:112784208 451.055