Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g1692 ATGGAAAAAAGGAAGAAGGAGCCTAGATTGGAAACAAGAACCGGATGTGAAGCCCGAATGGATGTTAAATTTGTACCAGAAAGTGGAAGGTGGCATATCTTTTATTTCTCTGACGAACACAACAATGATCTATTGGATACACAATTCAGTGCTATGTTGCCTGCCCACAGAAAAATGTCAGAGGCAGATATTATGCAAATGATGAACATGCTAAAGTCAGGGATTAGCATCTCACAGATATTTGGTCATATGTGGGCTACTGCATATCTAAGAGGAAAATTCTTTACTGGCTTTAGAACTACATCAAGATGTGAAGGTTTACACTCAGTTGTGGGAAGGTATGTGGGGTCGCGGTATGATTTGACAAGTTTTGTAGAGCATTTTCAAAGGTGTGTTGCACACATGCGCTTTAAAGAATTTAATGCTGATTATGAATCTACACGTGGGGTGCCCGTCATGGAAACTTGTATAGAGCTGCTAGAGAGATATGCTGCTGAGTTATACACTCATGAGATATTTCTTTTCTTTCGGCCATTTCTCTCTAGAGCTGGATCAATGCGGGTGCTAAACATAGATAATACCGATGATTGCATAAAATACATTGTGTGTAAGCATGGGAGGCCCGATTTTATGTGGACCATTGATTTTCGTCAAGAAGAAATTATCTTCATGTGTACTTGTTTAAGAATGGAGTCATTTGGTATTCCCTGCGAACATATTGTGAAAGTTCTGGTTGACAGAGACATCTGTGAGATTCCCCGGTCATTGGTATTGGATAGATGGACAAAAAAGGTTAAATCAGCACTCAATGATCCAAGTGGGTTCACCAGGGATGCTATTGTTATTAGTTGTCAAAGTGCCTTGGTGGAATTTTCTAAACAATTGGCTGCTATTGCTGCTAAAGTACCAGAGAGATATGAAGAGACACGTGACATAATTATGAGATTGTACTCATCTTACAAGGCTGCAGACGAAGGCACTAATCAACCTCAGTCAGGTGTAGCTAGAAGTAGCAATCCGTATGTGCATCAAACCACTGGAGGCTCAGGACAACCATCTAAGAAGAAGAAGCGGCAACATTGTAGTGTTTGTCAAATGGAAGGACATAAGAAGACAACATGTCCTTGGCAAAAGGACATTGACAACAACGTTATAGAAAATGAAGCTAACGGTTCGGACGATGGCGACATGTGTACCGAAGCGACAGCTGAGTTAGATAGTGATAATTATCAACCTCCATAA 1242 0.4058 MEKRKKEPRLETRTGCEARMDVKFVPESGRWHIFYFSDEHNNDLLDTQFSAMLPAHRKMSEADIMQMMNMLKSGISISQIFGHMWATAYLRGKFFTGFRTTSRCEGLHSVVGRYVGSRYDLTSFVEHFQRCVAHMRFKEFNADYESTRGVPVMETCIELLERYAAELYTHEIFLFFRPFLSRAGSMRVLNIDNTDDCIKYIVCKHGRPDFMWTIDFRQEEIIFMCTCLRMESFGIPCEHIVKVLVDRDICEIPRSLVLDRWTKKVKSALNDPSGFTRDAIVISCQSALVEFSKQLAAIAAKVPERYEETRDIIMRLYSSYKAADEGTNQPQSGVARSSNPYVHQTTGGSGQPSKKKKRQHCSVCQMEGHKKTTCPWQKDIDNNVIENEANGSDDGDMCTEATAELDSDNYQPP* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g1692 413 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 4 76 IPR031052 GO:0006355
Ahy15g1692 413 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 83 316 IPR031052 GO:0006355
Ahy15g1692 413 MobiDBLite consensus disorder prediction 324 360 - -
Ahy15g1692 413 MobiDBLite consensus disorder prediction 386 413 - -
Ahy15g1692 413 Pfam FAR1 DNA-binding domain 3 45 IPR004330 -
Ahy15g1692 413 MobiDBLite consensus disorder prediction 324 352 - -
Ahy15g1692 413 Pfam SWIM zinc finger 225 244 IPR007527 GO:0008270
Ahy15g1692 413 PANTHER OS03G0181600 PROTEIN 4 76 - -
Ahy15g1692 413 PANTHER OS03G0181600 PROTEIN 83 316 - -
Ahy15g1692 413 ProSiteProfiles Zinc finger SWIM-type profile. 210 248 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g1692 Ahy-Chr15 43504203 43505444 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy15g1692 FAR1 1.00E-06 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g1692 - - aip:107620889 643.269