Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g1684 ATGTATAGCCCAGGATTCAGCTTTATGATCAATGCTTGCATTTTGTTGTCATTGATGTCTTTAATTTCTTCCCTGGAACCCCAACTTGGATCCACCCGCGTTGTCTTTCAGACAAATTATGGGGATATTGAATTTGGTTTCTTTCCCACTGTTGCACCCAAAACTGTTGATCACATCTTTAAGCTTGTCAGACTTGGAGGTTATAACACTAACCATTTCTTTCGGGTGGATAAGGGGTTTGTGGCCCAAGTAGCAGATGTTATGGGCGGAAGATCTGCTCCAATGAATGAGGAACAAAGAAAAGAAGCTGAAAAGACTGTTGTTGGCGAATTTAGCGAAGTCAAACATGTTCGTGGTATTCTTTCTATGGGAAGGTATGATGATCCAGACAGTGGTTCATCCTCATTCTCGATACTACTTGGAAATGCTCCTCATCTCGACGGCACGTATGCAATATTTGGAAGAGTTACTAAAGGTGATGATACATTGAAAAAGCTCGAGCAGCTGCCTACCCGTAAAGAGGGTATATTTGTAATGCCAACAGAACGCATCACGATTCTGTCATCGTATTACTATGACACGGAGACAGAAAATTGTGAGCAAGATAGATCGATATTGAAGCGCAGGTTAGCTGCATCCGCTGTTGAAGTTGAAAAACAGAGGATGAAATGCTTCCCTTGA 681 0.42 MYSPGFSFMINACILLSLMSLISSLEPQLGSTRVVFQTNYGDIEFGFFPTVAPKTVDHIFKLVRLGGYNTNHFFRVDKGFVAQVADVMGGRSAPMNEEQRKEAEKTVVGEFSEVKHVRGILSMGRYDDPDSGSSSFSILLGNAPHLDGTYAIFGRVTKGDDTLKKLEQLPTRKEGIFVMPTERITILSSYYYDTETENCEQDRSILKRRLAASAVEVEKQRMKCFP* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g1684 226 Gene3D - 22 199 IPR029000 -
Ahy15g1684 226 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP23 12 226 - -
Ahy15g1684 226 SUPERFAMILY Cyclophilin-like 27 193 IPR029000 -
Ahy15g1684 226 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 119 134 IPR002130 GO:0000413|GO:0003755
Ahy15g1684 226 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 148 163 IPR002130 GO:0000413|GO:0003755
Ahy15g1684 226 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 73 85 IPR002130 GO:0000413|GO:0003755
Ahy15g1684 226 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 47 62 IPR002130 GO:0000413|GO:0003755
Ahy15g1684 226 CDD cyclophilin 35 188 - -
Ahy15g1684 226 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 34 188 IPR002130 GO:0000413|GO:0003755
Ahy15g1684 226 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP23 12 226 IPR044233 -
Ahy15g1684 226 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 35 191 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g1684 Ahy-Chr15 42476329 42479232 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g1684 34 189 U-box Gene Family AT5G67530 28.659 7.88e-10 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g1684 - - gmx:100819238 392.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g1684 15 42476329 42479232 Ahy15g1684 15 42476329 42479232 ECH