Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g1680 ATGAGGGGGGAGCCTTGGAGGGAGAAGAGACGATTGAAGGAGAGGCAGCAATGGGATAGGAGTGAAAGAGTTTGCCGCACCGAGGTGTCAGCAGCTAAGGTATTGCAAGAGACTTGCAACTACATCAAGAACTTGCACAGAGAAGTTGATGATCTAAGTGACCGATTGTCAGAGCTTTTGGCCAACACAGACTCCAACAGTGCTCAAGCAGCCATTATTAGGAGCTTACTTATGTAA 237 0.4768 MRGEPWREKRRLKERQQWDRSERVCRTEVSAAKVLQETCNYIKNLHREVDDLSDRLSELLANTDSNSAQAAIIRSLLM* 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g1680 78 PANTHER TRANSCRIPTION FACTOR PRE6 26 78 - -
Ahy15g1680 78 Coils Coil 42 62 - -
Ahy15g1680 78 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 26 67 IPR036638 GO:0046983
Ahy15g1680 78 PANTHER TRANSCRIPTION FACTOR PRE 26 78 IPR044293 GO:0006355|GO:0040008|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g1680 Ahy-Chr15 40660241 40669531 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g1680 28 77 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G74500 80.000 4.82e-22 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g1680 - - ahf:112748341 157.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g1680 15 40660241 40669531 Ahy15g1680 15 40660241 40669531 ECH
Ahy15g1680 15 40660241 40669531 Ahy11g1881 11 122859519 122861470 ECH