Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g1628 ATGGCGAGTGGCAAGCTTTATGGGGGTTCCAGCATGTCCCTTCTGCTCCAAAACGAGAGTAGACTTCCCTCTTCATCTCAAGTTCTTGACTCTCTTTGGCTTCACACCTCTGACCCTTCTTCTTTCCAAGGTTCAAAAAACATGGTTGTTGATTTTGAGAATGGAAGAGGAAGCAGCATAAGAGACAGAAGCTTCTTCCAACAAGGGCTAATAGAAAAAGAAGACAATAATAATAACGGGTGTGATGACGATTATGACCCTTCATGCTTCCAACAAACGGGTAGTAACGGTGGTAACAGCAAGAAACGGAGGCTAACGAGCGAGCAGGTTCAGTTCCTGGAACGAAGCTTCGAGATGGAGAACAAGCTCGAACCCGAAAGAAAAGTTCAGCTTGCGAAAGAGCTTGGGTTGCAGCCAAGGCAAGTGGCGATTTGGTTCCAAAACCGAAGGGCAAGGTTCAAGACGAAGCAGCTTGAGAAAGAGTATGGTGCACTGAAAGCTAGCTTTGACAAACTCAAAGGTGACTATGAAAGTCTTCTTCAACAGAATGACAAGTTAAAACAAGAGGTGAATGCTCTTAGGAACAAGTTGATTCCTAGAGATAAAGAGGATGAGAATTGTTCTTCAGATGAAAAATCATCTCCACAGGATGTTGATACAATCAATTCAAACCACAACAAGGAGGAGGATGAGCCTATTATGATGGAATTGATGATCTCAAATTCAACCTCAAATGAAAATGGATCTAAGATGCCATTGCCACACCCAATCATTTTGACATGCAAGCAAGAAGATGCAAATTCAGCAAAAAGTGATGTCCTCGACGATTCGGCCGATAGTCCACATTGTACTAATAATGGAAACCACCACCACCACCACCACCATTTCTCGTCGTTCATGGAGGAGGAGCCGGCTGATTCGGATGATTTCTCGCAGGATGACGATGATAACCTTAGCGAAAACCTATTGACTCTTCCTTGTTTGCCTAAGGTTGAAGATAATGATGCATGCTACCATGAACAAAATGAGAACACTTGTGGTTTTGGTTTTCCAGTAGAAGACCAAACCTTTTGTTTCTGGCCTTACTAA 1089 0.4316 MASGKLYGGSSMSLLLQNESRLPSSSQVLDSLWLHTSDPSSFQGSKNMVVDFENGRGSSIRDRSFFQQGLIEKEDNNNNGCDDDYDPSCFQQTGSNGGNSKKRRLTSEQVQFLERSFEMENKLEPERKVQLAKELGLQPRQVAIWFQNRRARFKTKQLEKEYGALKASFDKLKGDYESLLQQNDKLKQEVNALRNKLIPRDKEDENCSSDEKSSPQDVDTINSNHNKEEDEPIMMELMISNSTSNENGSKMPLPHPIILTCKQEDANSAKSDVLDDSADSPHCTNNGNHHHHHHHFSSFMEEEPADSDDFSQDDDDNLSENLLTLPCLPKVEDNDACYHEQNENTCGFGFPVEDQTFCFWPY* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g1628 362 Coils Coil 169 196 - -
Ahy15g1628 362 MobiDBLite consensus disorder prediction 269 317 - -
Ahy15g1628 362 SMART HOX_1 99 160 IPR001356 GO:0003677
Ahy15g1628 362 PANTHER HOMEOBOX LEUCINE ZIPPER FAMILY PROTEIN 1 362 - -
Ahy15g1628 362 Pfam Homeodomain 101 154 IPR001356 GO:0003677
Ahy15g1628 362 MobiDBLite consensus disorder prediction 197 232 - -
Ahy15g1628 362 Gene3D - 93 163 - -
Ahy15g1628 362 MobiDBLite consensus disorder prediction 197 212 - -
Ahy15g1628 362 ProSitePatterns 'Homeobox' domain signature. 131 154 IPR017970 GO:0000981|GO:0006355
Ahy15g1628 362 SUPERFAMILY Homeodomain-like 87 158 IPR009057 -
Ahy15g1628 362 ProSiteProfiles 'Homeobox' domain profile. 96 156 IPR001356 GO:0003677
Ahy15g1628 362 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 1 362 IPR045224 GO:0003700
Ahy15g1628 362 PRINTS Lambda-repressor HTH signature 136 152 IPR000047 GO:0003677
Ahy15g1628 362 PRINTS Lambda-repressor HTH signature 127 136 IPR000047 GO:0003677
Ahy15g1628 362 CDD homeodomain 101 157 IPR001356 GO:0003677
Ahy15g1628 362 Pfam Homeobox associated leucine zipper 156 197 IPR003106 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g1628 Ahy-Chr15 34757398 34760072 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g1628 101 230 Homeobox Transcription Factor Family AT3G01470 56.818 3.53e-41 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Ahy15g1628 Homeodomain 2.90E-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g1628 - K09338 adu:107489132 711.835
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g1628 15 34757398 34760072 Ahy15g1628 15 34757398 34760072 ECH
Ahy15g1628 15 34757398 34760072 Ahy3g3520 3 134162105 134163408 hybridization
Ahy15g1628 15 34757398 34760072 Ahy5g1013 5 21791895 21794525 PCT