Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g1622 ATGCACTCCCTCACCACCGCACCCTCTTTTTCTTCCCTTTCTTTCCATTTCTTTCCCCACCGCCACCGCCACACCCTCTTTCAGTTAACTCCTCCCTTCATCTTCTCCTTCCGGTACACCACCGCCAAGAGGCTCCAGGTGCAGCTCCACGTGGAGGAGGAGAAATCACTGAGGAAGAAAAAAGGGAGGAAGGGTCTTTGCTGCAAGGAGGACTTGGGTGGGGCCGAAGAGGAAGTGTTCTCTCCGCTGGAAGCGGAGATTCTTGAGTTCATGCGGAGCTCCAAGAAACCATCAGCATTTCCGACGAGGGAGGAGCTGGTGGCTTCTGGGAGGGTTGATTTGGTTGATGCCATTGTTACCAAAGAATGCTATCTTGTTTATGGCTGGGATTTGGATCGTGGGTCACGTGAAAGTTACGATTTTGATGGTGCTTCTGTTGCTGAGATTCATGGTCAAGCATCAAGGGCTTCTGGGTTTTCTTCCTCTTCTGATGACGATAACTCTTGCCAGCAAGCCAAATCAATGGATATCGAAGTTGAGGAGTCAGGCATTGAGGGTATATTGAATCGGCTGGAGAGACAGAGAAGTAATTCCTTTGGACTTGGGTTAACAGAGAAAGATGAAAGTGATCCTTCCAGAAACAGTGAAGATAAAAATACAGTAAGTACTCTTCATGGTGGTTTGATCAAACATGATCAGCACAGATCTCAATTAGGCAGTGAAAATTTAAGAAACTCCCTTGAGCCTGACACATGGAGAAGTTGGATTATCCAGAGGAATGGTTCTTCAAATGTAGATTTTGAAGCTGCTGAAATTGTTCCTAGTGAAATTAGGGAGTCTTCTGCTGAACCTGCAAATAGAGAAGCAGGGTTCAGTTCTCTTGATGGGGATGCAAATCACAAGGATATCAAATCCCGTATCCGGAATCTGGAATCAGAGCTATCCTCTGCACTTCATTCGTTGAGATCTAAAGCTGATTATGTTACAATGCAGATGGATCAGAAGAACTCATCAGATGATCTAGCAAAGTATTCCGATGCTTGGGAATTCCAAGAAACTGAGATAATGAATGCTCAGGACAGGCTGCGCTCCATACGTGCTAAGTTGTCAGTATTAGAAGGAAAGATGTCATTGGCAATAATGGATGCACACAAAATTGTTGAAGAGAAGCAGAAGAGGATTAATAATGCTCACAGAGCCTTGCAAATTCTGAAGATGATTTGTGTAGTTTGGCATAATCCAGCTTCACAAGTATATTTAGTAGGATCCTTTGATGGTTGGTCCACCCAGAGAAAAATGGAGAAATCAAATACTGGCATGTTTTCTTTGAACTTGCAGCTATATCCTGGAAAATACGAGATCAAATTCATTGTTGATGGTGAATGGAAAGTTGATCCACTGCGGCCTATTGTTGTTACCGACAAAGGTTATGAGAACAATCTCCTCGTGGTTCCTGATTAG 1461 0.4408 MHSLTTAPSFSSLSFHFFPHRHRHTLFQLTPPFIFSFRYTTAKRLQVQLHVEEEKSLRKKKGRKGLCCKEDLGGAEEEVFSPLEAEILEFMRSSKKPSAFPTREELVASGRVDLVDAIVTKECYLVYGWDLDRGSRESYDFDGASVAEIHGQASRASGFSSSSDDDNSCQQAKSMDIEVEESGIEGILNRLERQRSNSFGLGLTEKDESDPSRNSEDKNTVSTLHGGLIKHDQHRSQLGSENLRNSLEPDTWRSWIIQRNGSSNVDFEAAEIVPSEIRESSAEPANREAGFSSLDGDANHKDIKSRIRNLESELSSALHSLRSKADYVTMQMDQKNSSDDLAKYSDAWEFQETEIMNAQDRLRSIRAKLSVLEGKMSLAIMDAHKIVEEKQKRINNAHRALQILKMICVVWHNPASQVYLVGSFDGWSTQRKMEKSNTGMFSLNLQLYPGKYEIKFIVDGEWKVDPLRPIVVTDKGYENNLLVVPD* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g1622 486 CDD E_set_AMPKbeta_like_N 406 484 - -
Ahy15g1622 486 Pfam Glycogen recognition site of AMP-activated protein kinase 409 484 IPR032640 -
Ahy15g1622 486 Coils Coil 355 375 - -
Ahy15g1622 486 MobiDBLite consensus disorder prediction 199 221 - -
Ahy15g1622 486 MobiDBLite consensus disorder prediction 277 298 - -
Ahy15g1622 486 Gene3D Immunoglobulins 400 486 IPR013783 -
Ahy15g1622 486 PANTHER PROTEIN PTST HOMOLOG 2, CHLOROPLASTIC 1 484 - -
Ahy15g1622 486 SUPERFAMILY E set domains 406 485 IPR014756 -
Ahy15g1622 486 PANTHER PROTEIN PTST HOMOLOG 3, CHLOROPLASTIC 1 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g1622 Ahy-Chr15 34587672 34591985 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g1622 407 486 Protein tyrosine phosphatase (PTP) family AT3G01510 32.927 2.48e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g1622 - - ahf:112797483 857.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g1622 15 34587672 34591985 Ahy15g1622 15 34587672 34591985 ECH