Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g1611 ATGCTTCGTGAAAGTCAAATGCAAAAGACAATTGTTGCATTACAAAACGGAGATGTTTCTAGTGGGCGTGGCTTAAATCAAGAAACAACATTGAAAAGGGCAGGTGATACTCGATGGGGCTCACATTATGGTACAATACTTAGCTTGATTTCTATTTTTTCTTCCATGGTAGAAGTTCTTGAAGTGATTGAGGAAGATGGAAATAATCCTGAACAAAGAGCTGAAGCATGTCAATTATTGAATCATACTCAATCTTTTGAATTTGTATTCAATTTACATTTGATGAAAAGTATATTAGGAGTTACTAATGAGTTGTCTCAAACTCTACAAAGAAGTGATCAAGACATTATAAATGCTATGACATTGGTTAAAGTGTCCAAGCAACGATTGCAAAGTATAAGAGATGATAGTTGGTCCTATTTGCTCAATGAAGTTTCACTATTTTGTGATAGTCACAATATTCTTGTTCCAAATATGAATGACATATTTGTAACACAAGGAAGAGCAAGGCGCAAAATCCAAAAGGTCTCAAACTTGCATCATTTTCAAGTTGAATTATTTTATCAAGTGGTTGATAGACAACTTCAAGAGCTCAACAATCGTTTTACAGAGGTAAATACCGAGCTACTTCTTTATATAGCTTGTTTGAATCCAAGTGACTCGTTTTTTGCATTTGATAAGGAGAAGTTGCTTCGTTTAGCTGAATTTTATCCACATGAATTCTCTTCTACTCAACTTTTGGCACTTGATAGTCAACTTGAGAACTTTATATTGGATATGTGTCTTGATGATCAATTCTCAAATATAAATAGAATCAGTGGACTATCTCAAAAGTTAGTTGAGACAAAAAAGCATGTTGTTTATCCATTGGTGTTTCTTCTATTGAAATTAGCTTTGATTCTACCTGTGGCAATGGCATCAGTTGAGAGAACATTTTCTGCTATGAATATCATAAAGAGTCGACTTCGTAATCGAATGGGAGATGAGTGGTTGAATGATTGTTTGATGGATATGGCTTCGATACTTGGGGATGCAATCGACTACTTGAGGGAGTTACTGCAGTGGATTAATAATCTTCACGAGTCAACTCCACCTGGCTCTTCGCTGCAATCTTCCACCACCAGCCTTCAACCATTGACACCCATGCCGCAAACGCTTATGTGCCGGGTGAAGGAGGAATTGTATTCTGGTGTCTTGCCAAGTGTAACACCCTAA 1215 0.3654 MLRESQMQKTIVALQNGDVSSGRGLNQETTLKRAGDTRWGSHYGTILSLISIFSSMVEVLEVIEEDGNNPEQRAEACQLLNHTQSFEFVFNLHLMKSILGVTNELSQTLQRSDQDIINAMTLVKVSKQRLQSIRDDSWSYLLNEVSLFCDSHNILVPNMNDIFVTQGRARRKIQKVSNLHHFQVELFYQVVDRQLQELNNRFTEVNTELLLYIACLNPSDSFFAFDKEKLLRLAEFYPHEFSSTQLLALDSQLENFILDMCLDDQFSNINRISGLSQKLVETKKHVVYPLVFLLLKLALILPVAMASVERTFSAMNIIKSRLRNRMGDEWLNDCLMDMASILGDAIDYLRELLQWINNLHESTPPGSSLQSSTTSLQPLTPMPQTLMCRVKEELYSGVLPSVTP* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g1611 404 Pfam hAT family C-terminal dimerisation region 283 335 IPR008906 GO:0046983
Ahy15g1611 404 SUPERFAMILY Ribonuclease H-like 26 335 IPR012337 -
Ahy15g1611 404 PANTHER GENERAL TRANSCRIPTION FACTOR 2-RELATED ZINC FINGER PROTEIN 2 338 - -
Ahy15g1611 404 PANTHER GENERAL TRANSCRIPTION FACTOR 2-RELATED ZINC FINGER PROTEIN-RELATED 2 338 - -
Ahy15g1611 404 Coils Coil 188 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g1611 Ahy-Chr15 33543854 33548964 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g1611 336 401 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 69.565 1.10e-20 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g1611 - - ahf:112735508 607.06