Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g1598 ATGGCAGAAAAAAATAGTGACTTGAAGCTTTTGAGTGCGTGGTACAGTCCAATGGCCACAAGGGTCAAGATCGCACTTAACATCAAAGGATTGGAATATGAGAACATTGAAGAGGACTTGAACTCCAAAAGTGATCTTCTTCTTCGTTCCAATCCTGTGCACAAGAAAATCCCAGTTTTAATTCATGGTGACAAACCCATATGTGAATCCGTACTCATAGTTCAATATATTGATGAGGTTTGGTCCAATGGTCCTTCTATCCTTCTTCAAGATGCATATGACAGAGCAATTGCTAGATTCTGGGTTTCCTATATTGATGAAAAGTTATTTGTTTGCACGATGAGCATTCTAGAAGCTGGTGAAGATGAAGAGCAAAAGAAGCCACACTTTGAGCAATTGGAGGAAGAAATACTTGTGAGGTTGGAAGAAGCATTCAACAAATACAGTGAAGGAAAGTCCTTCTTTGGAGGGAACAAGATTGGACTCATTGACATTATGTTTGGGAGCTTCTTGCCTGTTCTTGGTCTGATAGAAGAGATTAATGGAAAGAAGGTACTTGTCGATGACAAGTTTCCGGGGTTGGTGAATTGGGCTGCCAATTTCACTGCGAATTCGGCTGTGACCGGAACTCTTCCTGAGATTGACAGGCTTATTTTATTTGCCAAGGCTCAACAGCAAAAATGGGCTCTCGCTTATAAAGCTACCTCTGCCAACTAA 717 0.4114 MAEKNSDLKLLSAWYSPMATRVKIALNIKGLEYENIEEDLNSKSDLLLRSNPVHKKIPVLIHGDKPICESVLIVQYIDEVWSNGPSILLQDAYDRAIARFWVSYIDEKLFVCTMSILEAGEDEEQKKPHFEQLEEEILVRLEEAFNKYSEGKSFFGGNKIGLIDIMFGSFLPVLGLIEEINGKKVLVDDKFPGLVNWAANFTANSAVTGTLPEIDRLILFAKAQQQKWALAYKATSAN* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g1598 238 CDD GST_N_Tau 8 81 - -
Ahy15g1598 238 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 230 IPR010987 -
Ahy15g1598 238 SFLD Main.3: Omega- and Tau-like 4 231 IPR045073 -
Ahy15g1598 238 CDD GST_C_Tau 92 223 IPR045074 GO:0004364|GO:0006749
Ahy15g1598 238 SUPERFAMILY Thioredoxin-like 7 110 IPR036249 -
Ahy15g1598 238 Gene3D Glutaredoxin 1 86 - -
Ahy15g1598 238 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Ahy15g1598 238 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 7 222 IPR045073 -
Ahy15g1598 238 SUPERFAMILY GST C-terminal domain-like 79 226 IPR036282 -
Ahy15g1598 238 Pfam Glutathione S-transferase, N-terminal domain 7 79 IPR004045 -
Ahy15g1598 238 Pfam Glutathione S-transferase, C-terminal domain 108 203 IPR004046 -
Ahy15g1598 238 Gene3D - 87 232 - -
Ahy15g1598 238 SFLD Glutathione Transferase (cytosolic) 4 231 IPR040079 -
Ahy15g1598 238 PANTHER GLUTATHIONE S-TRANSFERASE U17 7 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g1598 Ahy-Chr15 33139982 33142474 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g1598 5 222 Glutathione S-transferase Gene Family AT1G10370 52.511 2.87e-70 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g1598 K00799 - gmx:547576 293.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g1598 15 33139982 33142474 Ahy3g3502 3 133897853 133899661 hybridization
Ahy5g1038 5 24258429 24263791 Ahy15g1598 15 33139982 33142474 PCT
Ahy15g1598 15 33139982 33142474 Ahy5g1039 5 24301288 24304566 PCT