Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g1582 ATGAAGAGGTCTTCTAATTCCTCCTCTTCATCTTCATCGACTTCTATCCGTGCTGGTTTTGAATTAGAGATAAATAATAATGGTAAATATCCAAAAAGCAAAAATAGCATAAATGATGTGAAGTTACCACTGAATAAAGTATTCAAGAGAACAAATAGTTGTGGCAACAAAAGAAGCTCTATTTATAGAGGAATCACCAGACATAGGTGGACAGGTAGGTTTGAAGCTCATCTGTGGGACAAGAATTTTTGGAATAATATTCAGAGTAAAAAGGGACGACAAGTTTATTTGGGGGCATACGATACAGAAAAAGCTGCTGCTCGCTCTTATGATCTTGCAGCTCTAAAGTATTGGGGATCTAATACAATCTTGAATTTTTCGATAGAAACATATGCCAAGGAAATTGAGGAAATGAAGGATATTTCACAAACTGAATACTTGGCTTCTCTGCGAAGAAGGAGCAGTGGATTTTCGAGAGGTGTTTCCAAGTATCGTGGAGTGGCGAGGCATCACCACAATGGAAGGTGGGAAGCACGAATCGGAAGAGTAAATGGCAACAAGTACCTTTATCTGGGGACCTATAACACTCAAGAAGAGGCAGCAGCAGCATATGATAAAGCAGCCATAAAGTATAGAGGAATAAATGCAGTAACAAACTTTGACATAAGCAATTATATTGACAAAATAAAGAAGAATGAGCCGTCTATGAAAAAAGCACAAACACAAATAACTCCAATCTCTACTGAATTTGAAGAAGCAGAAGTAGTGGAGCAAGAGGCTCCTTCCACAGTAGTGGCACATCCAGCAAATTTAGAAAATATGCAAAAGGAAAGAGAGCAGCCAAACACGGACATCAACGGCATGCTTTCCCGGGATTTGAGATGGAGTTTCATGGATGCTGAGCTGTCCGAGTTCAACGTAAATGACATTTTTCAAGGTAAAGGTAGTGGGTTGGAGGATGATATCAACTTTCTGTGTATGGCTGATCCTGATGAGAATAGTTTCAATCTGAACACTATCTTTGACGGTCTTGAAAAATGTGATGGAGATATGCATGTGCATGCCAATTATTAA 1074 0.3901 MKRSSNSSSSSSSTSIRAGFELEINNNGKYPKSKNSINDVKLPLNKVFKRTNSCGNKRSSIYRGITRHRWTGRFEAHLWDKNFWNNIQSKKGRQVYLGAYDTEKAAARSYDLAALKYWGSNTILNFSIETYAKEIEEMKDISQTEYLASLRRRSSGFSRGVSKYRGVARHHHNGRWEARIGRVNGNKYLYLGTYNTQEEAAAAYDKAAIKYRGINAVTNFDISNYIDKIKKNEPSMKKAQTQITPISTEFEEAEVVEQEAPSTVVAHPANLENMQKEREQPNTDINGMLSRDLRWSFMDAELSEFNVNDIFQGKGSGLEDDINFLCMADPDENSFNLNTIFDGLEKCDGDMHVHANY* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g1582 357 SUPERFAMILY DNA-binding domain 60 128 IPR016177 GO:0003677
Ahy15g1582 357 Pfam AP2 domain 162 213 IPR001471 GO:0003700|GO:0006355
Ahy15g1582 357 Pfam AP2 domain 61 119 IPR001471 GO:0003700|GO:0006355
Ahy15g1582 357 PRINTS Ethylene responsive element binding protein signature 62 73 IPR001471 GO:0003700|GO:0006355
Ahy15g1582 357 PRINTS Ethylene responsive element binding protein signature 203 223 IPR001471 GO:0003700|GO:0006355
Ahy15g1582 357 ProSiteProfiles AP2/ERF domain profile. 61 127 IPR001471 GO:0003700|GO:0006355
Ahy15g1582 357 Gene3D AP2/ERF domain 61 129 IPR036955 GO:0003700|GO:0006355
Ahy15g1582 357 Gene3D AP2/ERF domain 162 223 IPR036955 GO:0003700|GO:0006355
Ahy15g1582 357 ProSiteProfiles AP2/ERF domain profile. 163 221 IPR001471 GO:0003700|GO:0006355
Ahy15g1582 357 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR WRI1 2 292 - -
Ahy15g1582 357 CDD AP2 162 223 IPR001471 GO:0003700|GO:0006355
Ahy15g1582 357 SUPERFAMILY DNA-binding domain 162 223 IPR016177 GO:0003677
Ahy15g1582 357 CDD AP2 60 126 IPR001471 GO:0003700|GO:0006355
Ahy15g1582 357 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 2 292 - -
Ahy15g1582 357 SMART rav1_2 61 133 IPR001471 GO:0003700|GO:0006355
Ahy15g1582 357 SMART rav1_2 163 227 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g1582 Ahy-Chr15 32463399 32472631 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g1582 104 231 AP2-EREBP Transcription Factor Family AT5G57390 31.429 2.54e-12 65.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-AP2 Ahy15g1582 AP2 4.90E-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g1582 - - adu:107463124 601.282