Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g1580 ATGAGTCAGCCCGAGCGAATTCCGTCGTCTCGGACGGTTCGACTCGGAAGAGTTCAGCCGCAGTCGCCGGGTCACCGCACCATATACTGCAACGATCGCGAGGCCAATCTTCCTGTTCGATTCAAGGGGAATTCAATATCGACTACAAAGTACAACTTCTTCACTTTTTTGCCAAAAGGATTGTTTGAACAGTTTAGGCGGGTTGCTAATCTCTACTTCCTTACAATCTCAATTTTGTCTACCACGCCAATCAGCCCGGTGTCTCCAATAACTAATGTGATTCCTCTATCTTTGGTGCTGCTCCTCTCACTTATTAAGGAAGCTTTTGAGGACTGGAAGCGTTTTCAGAATGATATGTCCATAAACAATAATATGATAGATGTTTTACAAGACCAAAAGTGGGTGTCTATTCCATGGAAAAAGTTGCAAGTTGGTGATGTCATCAAGGTTAAGCAGGATGGATTCTTTCCTGCAGATCTGCTTTTTCTGGCTAGTACAAATGCAGACGGTGTTTGCTACATTGAGACTGCTAATTTGGATGGGGAAACCAATTTGAAGATCAGGAAAGCATTGGAAAAAACATGGGATTACTTGACTCCGGAGAAGGCATCTGAGTTCAAAGCTGAAGTTCAGTGTGAGCAGCCAAACAATTCATTGTATACCTTCACTGGCAATCTTATACTTCAAAATCAAACACTGCCTGTCAGCCCAAATCAACTTTTATTGCGAGGCTGCAGTCTCAGGAATACAGAGTATATTGTTGGGGTGGTCATTTTTACTGGACATGAAACAAAGGTGATGATGAATGCTATGAATGTTCCTTCCAAAAGAAGTACATTAGAGAGGAAGCTTGACAAGCTCATTCTCACTCTTTTCGCCACTCTTTTTGTGATGTGTTTTATTGGAGCTGTTGGCAGTGCTGTCTTTGTAAACAAGAAGTATTTCTACCTACATCTTGAATCATCAGAGGAGGGCGGAGCACAGTTTGACCCAAGAAACAGATTTTTGGTTTTCCTTCTGACTATGTTTACCCTCATCACGTTATACTCAACTATCATCCCAATTTCACTTTATGTGTCCATAGAGATGATTAAATTTATTCAATCCACTCAATTTATCAACAAGGACCTGCACATGTACCATCTTGAAACCAATACCCCGGCATTGGCCCGAACTTCCAATCTGAATGAAGAACTTGGGCAGGTGGAATACATCTTCTCTGACAAAACTGGGACTCTAACAAGAAACTTAATGGAGTTCTTCAAGTGTTCAATTGGAGGAGAAGTCTATGGAACTGGTGTGACTGAAATTGAAAGGGGAATTGCTGAGCGTAGTGGCAAAAAAATTGAGGAAAATATCTCATCCAATGCAGTGCGAGAGAAGGGTTTTAATTTTGATGATCCTAGGCTTATGAGAGGAGCTTGGAGGAATGAGCCTAATCCTGATAACTGCAAGGAATTCTTTAGGTGCCTTGCTATCTGCCATACTGTGCTTCCTGAGGGTGATGAGTCCCCCGAGAAGATTAAATATCAAGCTGCTTCACCTGATGAGGCTGCTCTGGTTATTGCTGCAAAGAACTTTGGTTTCTTCTTTTATAGGCGAACACCAACAATGATATATGTCCGCGAATCACATGTTGAGAAGATGGGTAAAATTCAAGATGTTCCATATGAGATTTTGAATGTGCTTGAGTTTAATAGTACAAGGAAGCGCCAGTCTGTTGTATGTCGCTATCCTGATGGAAGGCTTGTATTGTACTGTAAGGGTGCTGATACTGTAATCTATGAGAGGTTAGCTGATGGTAATAATGATATTAAGAAAGTGACTAGGGAGCATTTAGAACAGTTTGGATCATCTGGGCTACGTACATTATGCCTGGCTTACAAAGAATTGCATCCTGATGTTTATGAAAGCTGGAATGAGAAGTTTATTCAGGCAAAATCTTCTCTGCGTGATCGTGAAAGGAAGTTAGATGAGGTGGCAGAACTTATAGAGCATGATCTCATCTTGATTGGTAGTACTGCCATAGAAGACAAGCTCCAAGAAGGAGTACCAGCTTGCATAGAGACTCTTAAAAGAGCTGGCATTAAAATATGGGTACTTACAGGGGACAAGATTGAAACAGCTATTAATATTGGCTATGCATGCAATTTAATAAACAATGAGATGAAGCAATTCATTATCAGCTCTGAAACTGATGCAATTAGAGAGGTTGAAGAAAGGGGGGACCAAATAGAAATCGCACGGTTTATGAAAGAAGAAGTTAAAAAAGAACTGAAGAGCTGCCTTGAGGAGGCCCAAAGCTACTTTAGCTCTCTCTCTGGTCCTAAATTAGCACTTGTTATTGATGGAAAATGTCTAATGTATGCACTGGATCCAAGTTTGAGAGTCATGCTGCTGAATTTGAGTTTGAATTGTCATGCTGTTGTGTGCTGCCGAGTATCTCCTCTACAGAAAGCACAGGTCACTAGTTTGGTCAAGAAAGGTGCTCAGAAAATAACACTTAGTATTGGTGATGGGGCCAATGATGTTAGCATGATTCAAGCTGCTCATGTTGGTGTTGGCATAAGTGGCTTGGAGGGGATGCAAGCTGTGATGGCCAGTGATTTTGCTATTGCCCAGTTTCGATATCTTGCCGACTTGCTTCTTGTTCATGGCCGGTGGTCATATCTTCGAATATGCAAGGTGGTGACATACTTCTTTTACAAGAATCTCACATTCACTCTAACCCAATTTTGGTTTACATTTCAAGCTGGGTTTTCTGGCCAGAGATTCTATGATGATTGGTTTCAGTCATTATATAATGTCATATTCACAGCACTGCCTGTGATCATTGTTGGACTATTTGACAAGGATGTCAGCGCTTCTCTGTCCAAGAAGTATCCTGAACTATACATGGAGGGAATAAGAAATGTGTTTTTTAAGTGGAGAGTTGTGGCTATATGGGCCTTTTTTTCTCTCTACCAGTCTCTAATATTCTATTACTTTGTGAGTTCATCAAGTTTAAGTGGTAAAAATTCAGCAGGCAAAACATTTGGACTCTGGGATGTCAGTACAATGGCCTTCACATGTGTTGTAGTAACTGTCAACTTGCGACTTCTCATGATTTGTAATTCAATTACAAGATGGCACTATATTAGTGTTGGTGGAAGTATTTTAGCATGGTTTATTTTTATTTTTTTATATTCTGGGATCAGCACTCCTTATGATCGACAGGAGAATATGTATTTTGTCATATATGTCTTGATGAGTACATTATGTTTCTACCTCACACTACTACTTGTTCCTGTTGCTGCACTTTTCTGTGACTTTATTTACCAAGGGGTTCAGAGATGGTTCTTCCCATATGATTATCAGATTATTCAAGAGATGCATAGACATGATGATACTGATACCAGCAGGGCACACCTGTTAGAAATAGGGAACAACCTTACACCAGCTGAGGCCAGGAGCCATGCCATATCTCAACTCCCACGTGAGATATCAAAGCACACTGGGTTTGCTTTCGACTCACCTGGTTACGAGTCATTTTTTGCCGCACAACTTGGTGTATTTGCTCCAACAAAGGCATGGGATGTTGCAAGACGTGCTAGCATGAAATCTCGGCCAAAGATTGGACATAAGTAA 3627 0.4092 MSQPERIPSSRTVRLGRVQPQSPGHRTIYCNDREANLPVRFKGNSISTTKYNFFTFLPKGLFEQFRRVANLYFLTISILSTTPISPVSPITNVIPLSLVLLLSLIKEAFEDWKRFQNDMSINNNMIDVLQDQKWVSIPWKKLQVGDVIKVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALEKTWDYLTPEKASEFKAEVQCEQPNNSLYTFTGNLILQNQTLPVSPNQLLLRGCSLRNTEYIVGVVIFTGHETKVMMNAMNVPSKRSTLERKLDKLILTLFATLFVMCFIGAVGSAVFVNKKYFYLHLESSEEGGAQFDPRNRFLVFLLTMFTLITLYSTIIPISLYVSIEMIKFIQSTQFINKDLHMYHLETNTPALARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEVYGTGVTEIERGIAERSGKKIEENISSNAVREKGFNFDDPRLMRGAWRNEPNPDNCKEFFRCLAICHTVLPEGDESPEKIKYQAASPDEAALVIAAKNFGFFFYRRTPTMIYVRESHVEKMGKIQDVPYEILNVLEFNSTRKRQSVVCRYPDGRLVLYCKGADTVIYERLADGNNDIKKVTREHLEQFGSSGLRTLCLAYKELHPDVYESWNEKFIQAKSSLRDRERKLDEVAELIEHDLILIGSTAIEDKLQEGVPACIETLKRAGIKIWVLTGDKIETAINIGYACNLINNEMKQFIISSETDAIREVEERGDQIEIARFMKEEVKKELKSCLEEAQSYFSSLSGPKLALVIDGKCLMYALDPSLRVMLLNLSLNCHAVVCCRVSPLQKAQVTSLVKKGAQKITLSIGDGANDVSMIQAAHVGVGISGLEGMQAVMASDFAIAQFRYLADLLLVHGRWSYLRICKVVTYFFYKNLTFTLTQFWFTFQAGFSGQRFYDDWFQSLYNVIFTALPVIIVGLFDKDVSASLSKKYPELYMEGIRNVFFKWRVVAIWAFFSLYQSLIFYYFVSSSSLSGKNSAGKTFGLWDVSTMAFTCVVVTVNLRLLMICNSITRWHYISVGGSILAWFIFIFLYSGISTPYDRQENMYFVIYVLMSTLCFYLTLLLVPVAALFCDFIYQGVQRWFFPYDYQIIQEMHRHDDTDTSRAHLLEIGNNLTPAEARSHAISQLPREISKHTGFAFDSPGYESFFAAQLGVFAPTKAWDVARRASMKSRPKIGHK* 1209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g1580 1208 ProSitePatterns E1-E2 ATPases phosphorylation site. 408 414 IPR018303 -
Ahy15g1580 1208 PRINTS P-type cation-transporting ATPase superfamily signature 837 856 - -
Ahy15g1580 1208 PRINTS P-type cation-transporting ATPase superfamily signature 406 420 - -
Ahy15g1580 1208 SFLD p-type atpase 388 888 IPR044492 -
Ahy15g1580 1208 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 413 675 IPR023299 GO:0000166
Ahy15g1580 1208 SUPERFAMILY HAD-like 394 879 IPR036412 -
Ahy15g1580 1208 Pfam Phospholipid-translocating P-type ATPase C-terminal 865 1115 IPR032630 -
Ahy15g1580 1208 SUPERFAMILY Calcium ATPase, transduction domain A 123 267 IPR008250 -
Ahy15g1580 1208 SUPERFAMILY Calcium ATPase, transmembrane domain M 40 1115 IPR023298 -
Ahy15g1580 1208 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 9 1204 - -
Ahy15g1580 1208 MobiDBLite consensus disorder prediction 1 23 - -
Ahy15g1580 1208 Gene3D - 667 877 IPR023214 -
Ahy15g1580 1208 Pfam Cation transport ATPase (P-type) 504 597 - -
Ahy15g1580 1208 CDD P-type_ATPase_APLT_Dnf-like 43 997 - -
Ahy15g1580 1208 SFLD C1.7: P-type atpase like 388 888 - -
Ahy15g1580 1208 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 9 1204 - -
Ahy15g1580 1208 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 41 1123 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Ahy15g1580 1208 Pfam E1-E2 ATPase 123 362 - -
Ahy15g1580 1208 Pfam Phospholipid-translocating ATPase N-terminal 28 92 IPR032631 -
Ahy15g1580 1208 Gene3D - 106 271 - -
Ahy15g1580 1208 MobiDBLite consensus disorder prediction 1 17 - -
Ahy15g1580 1208 Gene3D - 536 661 IPR023299 GO:0000166
Ahy15g1580 1208 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 810 916 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g1580 Ahy-Chr15 32345118 32361539 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g1580 5 1208 Primary Pumps ATPases AT1G59820 80.000 0.0 2070
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g1580 K14802 - gmx:100815547 2221.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g1580 15 32345118 32361539 Ahy3g3498 3 133835491 133860786 hybridization