LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy15g1569	ATGGCACTGAAGGTTGAATCTTCGTCACGAACTTCAAAATGGAAGTACCGTGTTTTCGTGAGTTTTAGGGGAAAAGACACCCGCGACGGTTTCACTGAGCATTTGTATGCAGCCTTGCAAAGGCAACGTATTCAAACGTTCAGAGAAAACAACAATGAAGAACTCCGAACAAGTACTGTTATCTCTGATCAGCAGCTCCTTCTTGCAATTGTCATACTGTCACCCAATTATGCGAATTCCACATCGTGTTTGGATGAACTCCGAAAGATTGTTGAAAGCAAAGGAAGCTCTGGCATGATATTGCCGGTGTTCTACGGTGTGGATCCTTTCGACGTACGGCACCAAAAGGGCACCTTTGCAGAAGCTTTTAGGAAACATGAGGAGAGATTTAATGGAGACAAAGAAAAGGTTCAGAAGTGGAGAGATGCTTTGAAATTCGTTGCACAATTAAGAGGTTGCAGCTCTCAACATCGATATGAAGCACAGCTCATCGATGAAATTGTTGAAGAAGCATGGACAAAAATAGAATCTAGATTGCCAACACAAGATGATAATAATGATGACGATGATGATGATCTAATTGCGATTAATGCAAAAGTAAATGAAGTATGTTCATGTTTAAGCCCAGAGTCAACAGATGTGCTCTTCATTGGAATATGGGGTATGGGTGGGTCAGGAAAAACTACTCTTACCTCTACTGTTTGCAAGAAAATCCGAAGCCAATTTGAAGAACACTGCATTCTTCGCGTTGGAGAGGTTTCGAGAGAAGGAGATCAAGATCTAGTTAACCTGCAAAATCAACTTCTTTCACATTTGAAACCAAAGTGCATGGTAATTAAAACTTTGAACCAAGGAAAGGATGCCATCAAAAACCTTTTGTACAAAAAGAAAGTTCTCATTGTCCTTGATGATGTGAGAACTACAAGACAGCTAGAGAATTTGGCAGGAAGCCGCGTTTGGTTTGGTCCGGGGAGTAGAATAATAGTTACTACTAGGGACCAACACTTGCTTAGTTCACATGGAGTAACACTGTTTAAATTGTATGAGATGAAAGCCTTGGATACTAATGAATCCCTTCAGCTATTCCATAAAGAAGCATTTAAAGGAGAGAAAAAACAAGAAGAGTATTTGGATTTGTCTAGAAAGTTCGTAGAATATGCTGGAGGCCTTCCTTTGGCACTTAAAGTGCTAGGTTCCAATCTTTGTACAAGAAACATTGATGAATGGGATGAGGCTTTCGATAAGATGAGAAAAGATCAAGATGGTGGTATTATGAACATACTTAGGATATGCTATGATATGTTGGAAGAAGGTCACAAGACTATATTTCTTGACATTGCATGTTTCTTTAAAGGGTGGTACAAAGATAAAGTGATAAGAATATTGAAAAATTGTGGCCTTCATCCGGCAATAGGAATAAGTGTACTTGTTGAGAAGTCATTGATAACTTGCAAAAAAGGAGTTTTAGGGATGCATGATTTACTTGAGGAAATGGGTAGAATGATGGACATGCAAGACTCTAAACAACATCTTGGACGCAGTAGGTTGTCCTCTCTAGATGACATTAATCAAGTATTGAAGGAAAATACGGGAATTGAGAAGATTGAAGGTGTGGTTTTGAAGCAACATAATAAAGATATTTTGAAAGATCATGGAGCATTCTCCAAGATGTGCAACCTAAGACTTCTCATCATATTATGTGAATTGCACCTGTCTCGTGGTTTCAAATGTCTTCCTAGCTCATTGAAAGTTCTTATTTGGGTGGAATGTCCTTTGAAGACTCTACCACTTGGTTTGCAACTACGTGAACTTGTTCACTTGCAAATGAATAATAGCAGAGTAGAACAACTTTGGAATGGAAGTCAGGTTTTTGAAAAACTAAGAGTTGTTGATTTGAGTTATTCCAGCAATCTGATTCGAATTCCAAATATTTCTAATGTTCCATTGCTTGAAGAGCTGATCCTTGATGGTTGTATATCGCTTGTTGAGGTTGACCAATCTGTTGGGCAGCACAAGAAGCTAGAAGTGTTAAGCCTTACAGGATGCATAAAGCTCGAAACCTTGCCCCGGAAATTCGAAATGAGTTCACTGAAGAGGCTCATTCTCTGTGGCTGCTCAAACGTGAAATCACTTCCTGAATTTGGGGAGAGTATGGAGTATTTGTCAGTGTTGAATTTAATGAAATGCTCAAGTCTTCTTTCCATTCCAGAAACTGTTACCAATTTGAAGTCACTGAAAATTCTCAATTTGTCCGGTTGCTCAAAAATCTGTAGACTGCCAGATAATATAAAGGAAAACTGGGCTTTGGAAGATCTTGATCTTAGTGAAACCTCTATAAGAGTGGTGGATTCATCTTTGTTTCAATTGGAAAATCTCGAAAAGCTTTCTTTTCGTGGTTGCAGTGGACCAGTATCCAACACCACCACCTCTGATTCGAGTGTTTCACGCTTAACATTGCCTCCTCATATCCCAGGACTTCCCTTGTTAACCATATTTGATCTAAGCTATTGCAATCTCCATCATGAATTGATTCCTGATCTGCGCCACTTATCATCATTGGAGACTTTGATTTTAAGTGGGAATACAGAGCTTATCTTAACTCACAGCGTTGCTAAACCTCCTATGCTGCATTTTCTTGAAGCAGAAGGTTGCCGACAATCGTTTGATCCATGTGTGTTAAATTTTCATGGGGAAGCTGGACTACTGTTAGATTTATGCAAGTTATGGAAGCTGTTCAAGACGGATTATAACAAGCTCTTATGTCAGGTTGTAGATCATAGTTATCCTATCACGTACCAGGAAATTCCTCCAAATTTTGGCAAGGAGATATTCTTTCCCATTGGTACACGTTTATCAGAGCTTGAATCAAGCGCATCAATCACAGTGGACATACCTAATGAATGTTGTGAGGGTAAGTGGTGGGGAATTGCTGTATTCCTTGCCTTCAAACCTCTAGAATCTTCAACTAATTTTCCGAGTCTAAAATTTGGTTGGAGCTTTGGAGCTTCAAATACTGATCCTGAAGTTGGCTCTTCTTTCTTATATCTCTCCTCCAATGCTGTAAAGGCGCATTATGATTGTTGTCTTGTAACGATGATAGTGAGTGAAAATTACATATACATTCAGCTACACCACAGAAGCTATGACAATGTAAGTGAATCAAAGCCTTTTAGCAAGCATCGAAAGCCTAATTTTAGTGAAAATAGTAGGCTGCGTTTTAGTGTGCAAGGAGAAGAGATAAATATGAAAGAATGTGGGTATCATGTCTTTGGTAATGAAGATTTTAGAAATAAATTCTCATTTAAATTGAACAAAGAGAGTACTGTCACACCAAATTCCAGGGATTCCAATAGTACAGAAGAAATGGACATCATATTAGAAGATGAAACGGAAACAACCAGCTTGGGTGATGATCGCATCGATGAAGAATCCAAGTTAGTTAGTGTTAATTCTGATCATATGGAGGCTGATATAAGAATAAAGGATTCGACCAGAGGTAGATGGAAAAAGGTAAGTAGCTTCATGACGAAGAAATGCATCTTTGGACTAAAGGGGTGTAAACCAAAGAAACGGTCCCACAAAGACAATGTATGA	3594	0.3884	MALKVESSSRTSKWKYRVFVSFRGKDTRDGFTEHLYAALQRQRIQTFRENNNEELRTSTVISDQQLLLAIVILSPNYANSTSCLDELRKIVESKGSSGMILPVFYGVDPFDVRHQKGTFAEAFRKHEERFNGDKEKVQKWRDALKFVAQLRGCSSQHRYEAQLIDEIVEEAWTKIESRLPTQDDNNDDDDDDLIAINAKVNEVCSCLSPESTDVLFIGIWGMGGSGKTTLTSTVCKKIRSQFEEHCILRVGEVSREGDQDLVNLQNQLLSHLKPKCMVIKTLNQGKDAIKNLLYKKKVLIVLDDVRTTRQLENLAGSRVWFGPGSRIIVTTRDQHLLSSHGVTLFKLYEMKALDTNESLQLFHKEAFKGEKKQEEYLDLSRKFVEYAGGLPLALKVLGSNLCTRNIDEWDEAFDKMRKDQDGGIMNILRICYDMLEEGHKTIFLDIACFFKGWYKDKVIRILKNCGLHPAIGISVLVEKSLITCKKGVLGMHDLLEEMGRMMDMQDSKQHLGRSRLSSLDDINQVLKENTGIEKIEGVVLKQHNKDILKDHGAFSKMCNLRLLIILCELHLSRGFKCLPSSLKVLIWVECPLKTLPLGLQLRELVHLQMNNSRVEQLWNGSQVFEKLRVVDLSYSSNLIRIPNISNVPLLEELILDGCISLVEVDQSVGQHKKLEVLSLTGCIKLETLPRKFEMSSLKRLILCGCSNVKSLPEFGESMEYLSVLNLMKCSSLLSIPETVTNLKSLKILNLSGCSKICRLPDNIKENWALEDLDLSETSIRVVDSSLFQLENLEKLSFRGCSGPVSNTTTSDSSVSRLTLPPHIPGLPLLTIFDLSYCNLHHELIPDLRHLSSLETLILSGNTELILTHSVAKPPMLHFLEAEGCRQSFDPCVLNFHGEAGLLLDLCKLWKLFKTDYNKLLCQVVDHSYPITYQEIPPNFGKEIFFPIGTRLSELESSASITVDIPNECCEGKWWGIAVFLAFKPLESSTNFPSLKFGWSFGASNTDPEVGSSFLYLSSNAVKAHYDCCLVTMIVSENYIYIQLHHRSYDNVSESKPFSKHRKPNFSENSRLRFSVQGEEINMKECGYHVFGNEDFRNKFSFKLNKESTVTPNSRDSNSTEEMDIILEDETETTSLGDDRIDEESKLVSVNSDHMEADIRIKDSTRGRWKKVSSFMTKKCIFGLKGCKPKKRSHKDNV*	1198

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy15g1569	1197	ProSiteProfiles	TIR domain profile.	14	175	IPR000157	GO:0007165
	Ahy15g1569	1197	Gene3D	-	352	436	IPR042197	-
	Ahy15g1569	1197	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	189	446	IPR027417	-
	Ahy15g1569	1197	PRINTS	Disease resistance protein signature	387	401	-	-
	Ahy15g1569	1197	PRINTS	Disease resistance protein signature	740	756	-	-
	Ahy15g1569	1197	PRINTS	Disease resistance protein signature	216	231	-	-
	Ahy15g1569	1197	PRINTS	Disease resistance protein signature	292	306	-	-
	Ahy15g1569	1197	PANTHER	TMV RESISTANCE PROTEIN N-LIKE	22	899	-	-
	Ahy15g1569	1197	SMART	till_3	15	150	IPR000157	GO:0007165
	Ahy15g1569	1197	Gene3D	Ribonuclease Inhibitor	714	899	IPR032675	-
	Ahy15g1569	1197	Gene3D	Ribonuclease Inhibitor	542	713	IPR032675	-
	Ahy15g1569	1197	SUPERFAMILY	L domain-like	544	920	-	-
	Ahy15g1569	1197	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	22	899	IPR044974	GO:0006952
	Ahy15g1569	1197	Gene3D	-	179	343	IPR027417	-
	Ahy15g1569	1197	SUPERFAMILY	Toll/Interleukin receptor TIR domain	7	152	IPR035897	-
	Ahy15g1569	1197	SUPERFAMILY	"Winged helix" DNA-binding domain	424	527	IPR036390	-
	Ahy15g1569	1197	Gene3D	-	9	178	IPR035897	-
	Ahy15g1569	1197	Pfam	NB-ARC domain	198	422	IPR002182	GO:0043531
	Ahy15g1569	1197	Pfam	TIR domain	15	183	IPR000157	GO:0007165

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy15g1569	Ahy-Chr15	31985887	32005019	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy15g1569	11	797	WRKY Transcription Factor Family	AT4G12020	31.846	2.68e-94	331

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy15g1569	-		-	adu:107489070	2247.63