Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g1531 ATGGATGATCTTCTTCGGCGAAGCACCTACCTGTGTGTTCTTCGTTATATGGTTGAGTGCGGGATCGCGTACTTTATCGAGAGCGTCAATCGTGACTTTCTTGCGGTTGGGACTGCTGGCGATGGTGTTCTTCGCCGCTGCCGTAATAGTTTCTTGGACAAGAATAATAATAATGGTGAAAAGCCTGCTTCTTTTGCAAAGACTCTAACACAATCCGATGCCAACAATGGCGGCGGTTTCTCTGTGCCTCGTTACTGTGCCGTAACCATTTTTCCAAGGCTTGATTACTCCACAGAGCCTCCGATTCAGACCATAATCGCAAAAGACGTGTATGGGCAGTGTTGGAAGTTCAGACACATTTATAAAGGCACGCCAAGGAGGTACCTTTTGACTACTGGTTGGAGCAATTTCGTTAACCACAAGAAGCTTATTGCCGGTGACTCCATTGTTTTCCTCTGA 459 0.4662 MDDLLRRSTYLCVLRYMVECGIAYFIESVNRDFLAVGTAGDGVLRRCRNSFLDKNNNNGEKPASFAKTLTQSDANNGGGFSVPRYCAVTIFPRLDYSTEPPIQTIIAKDVYGQCWKFRHIYKGTPRRYLLTTGWSNFVNHKKLIAGDSIVFL* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g1531 152 Pfam B3 DNA binding domain 65 151 IPR003340 GO:0003677
Ahy15g1531 152 ProSiteProfiles B3 DNA-binding domain profile. 65 152 IPR003340 GO:0003677
Ahy15g1531 152 SUPERFAMILY DNA-binding pseudobarrel domain 61 151 IPR015300 -
Ahy15g1531 152 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 49 152 IPR044835 GO:0003677|GO:0006355|GO:0009725
Ahy15g1531 152 SMART B3_2 65 152 IPR003340 GO:0003677
Ahy15g1531 152 CDD B3_DNA 64 151 IPR003340 GO:0003677
Ahy15g1531 152 Gene3D - 63 152 IPR015300 -
Ahy15g1531 152 PANTHER AUXIN RESPONSE FACTOR 16 49 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g1531 Ahy-Chr15 30116035 30117391 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g1531 53 152 B3 DNA Binding Superfamily AT2G28350 84.000 8.96e-57 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Ahy15g1531 B3 2.90E-18 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g1531 - - aip:107640480 318.931