Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g1520 ATGAATTACTCATCGTCTTCTTCAGAAAAGCCAGCATCATCAGAGCTGAAGCTATTAGGTTTTCCTTTGGAAAATACCACTAGCAGCACTAATAATAACTGTATAGTCTGTTCATACTGTGATCGAAGATTCCAGAACTTTCAAGCACTTGGAGGACACCAGAATGCCCATAGAAGAGAGAGGCAAATTATCGCTATGCATAATCTACTACCGTACCAATACAAACCAATAATAATCGCTGCTTTTGGTGACGCTGTATTGCCACCGCCGGAAAAGCTATTGTTACCTGCGGTGGAGGCATCACCGGCGGGAATGCACCGCCGCAGTAACTCTCCCTCTGTAGGAAGAGTTAATGATGATGACGACATTGATCTTGAATTGAGATTAGCTACCTCCCCTGATAAGGAGTCTATAAGGTGTTTGAGAAAACACCGCAGTTAA 441 0.4331 MNYSSSSSEKPASSELKLLGFPLENTTSSTNNNCIVCSYCDRRFQNFQALGGHQNAHRRERQIIAMHNLLPYQYKPIIIAAFGDAVLPPPEKLLLPAVEASPAGMHRRSNSPSVGRVNDDDDIDLELRLATSPDKESIRCLRKHRS* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g1520 146 ProSitePatterns Zinc finger C2H2 type domain signature. 37 57 IPR013087 -
Ahy15g1520 146 MobiDBLite consensus disorder prediction 99 119 - -
Ahy15g1520 146 ProSiteProfiles Zinc finger C2H2 type domain profile. 35 62 IPR013087 -
Ahy15g1520 146 SUPERFAMILY beta-beta-alpha zinc fingers 31 63 IPR036236 -
Ahy15g1520 146 Gene3D Classic Zinc Finger 9 71 - -
Ahy15g1520 146 PANTHER ZINC FINGER PROTEIN 5 4 62 IPR044299 GO:0010090
Ahy15g1520 146 PANTHER ZINC FINGER PROTEIN 6-LIKE 4 62 - -
Ahy15g1520 146 Pfam C2H2-type zinc finger 36 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g1520 Ahy-Chr15 29755474 29755914 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g1520 13 70 C2H2 Transcription Factor Family AT1G67030 41.667 3.17e-10 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g1520 - - aip:107640487 290.812