Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g1515 ATGGTTTGTAATAGAGAGGGTACACGGAGAAAGAAGTATCTGGAGATGGAGAATAGGAAAAGAGACCACAGGCCGATAACACGTGTAATGTGTCAAGCGAGAATTGGATTTCACTATGATATGAAATTGAGGAAGTGGAAAGTCACTGCATTTGAAGAGACTCACAATCATGACCTCATCCCACCTAAATATATACAATTTGTCCCCGCATATCGCGTAATGACCGAGGCCGACAAAGCGCAAGCCAACAGTCTGCATGATTATGGTGTGAGAACTTGCCATATAATGGGGTTCATGTTAAAGCAAAAGGGAGGACCTGGAAAAATTGGTTTTACAAAGAAGGATTTGTATAATCATTTCGACAAATCAAAGCGTGCTAAAGTGAAAGATGGTGATGCATATGCAGCATTGAGTTACTTGATTTCTAAGGCCGATGAGGATCCATTGTTGCAAGGGAAATTTACTCTGAAAGATAATAAACTTGAAAATTTAGTATGGGCTGACGGAGCTAGCATAATCGATTATCAATGTTTTAGTGATGTACTAGCATTTGACACAACATACCAGAAGAATAAATATAACAAGCCATTGGTTGTCTTCTCAGGAACTAACCATCACGGGCAGACATGCATATTTGGTTGTGGCTTGCTAGCAGATGAGAAGCATGAGACATATGTATTAGTTTTGAAGATGTTTCTTGAAATAATGGGTAATAAACATCCAACAGCAGCGGTGACAGATGGTGATCTTGCAATGAGAGGAGCAATTAGAGAGGTGATGCCAAATGCAACGCACCGACTTTGTGCATGGTATTTACATCGCAACGCGTGTGAAGCTATCAAAAATTCTGAGTTTCTTCATGGATTGAAGCACCTCATGTACACGGGAATTTTTTTCCGAATGAGTTTGAAGATAAATGGCATCGCTTGGACTACGTCACAATGTGAAGGAATTCATTCGTTGATAAAGCACTATATTGGTAAAAAATGTTATCTTTTGGATTTGATGCATAATCTTAACGAGGCAGTGAGGCAATATCGGACAAATGAGCTATTATCTGATTTTAAGTCATTGTTCTCAAGTCCAGTTTTAACTACATGTTTCGAAGACATCGAAAAGGAAGCAGCCAATATTTTTACCCACAATATGTTTAAAGAGGTAAGAAATGAGATACTAGAAGCGAGTAAACAAAACGTTGTCGGCCATTCAATTGACGGTAACAAAATTGAGGTGAGAATGAACAAATATCAAGAGCCGGCTATTGAATATAAGGTTCGGTATGATAGAAGCACTAACAACTTTGCTTGTGATTGTCGATTATTTGAGAGCCGTGGTATCCCTTGTTCCCATATTTTTTGTACTATGAGACATGACCATATTAGCACTATTTCTAATACTCTTATTCACAAGAGGTGGACGAAAGATGCTAAAAAAGAATACATTAGTTCACTTACTGCCGAGGATATTGAATCTGAAAAGATTGCTGGTGTTAGGTACGGTGCTCTAGCGACGCTTTTTTTTTCACTATGTGATAAAGCATCGAAACATCGAGATGACTTCATAGAAATCAGAGAAGACATTTTTGGATTGATTATGAAACTCCATAAAAGACACAATCCAAATAACAAGCTTCCTTCTACCGCCAACTTGGTAGGTGACCCAAGTGTTGTGAAGACAAAAGGAGCCCCACGACAAACAACCAAGACTGCTAAGGCCCGTAAGTGTTCGCATTGTAAACGGATTGGTCATACGGTTCGTAGGTGTCCAAAACTATATGGTGGAGAATGCTCACTAAGTTCGAACGAAGATAAATTGAATACTGACATTGACCAATCAAGTACAGAATCAAATGGTGTTACGGATATGTCTGATGAGGAAACAATACACCAATGTAACGAAAAACGTAGTGATTTATTTGAAAATATCCAGAAAAAAGTGAACAGGCCTCATGTCCAATCTACAAAAGTTCAAAGCAACCAGTACAACGATAACAGAACAGAAAAGCCTACTGCACAAACAAAAATAAATGCACCTGAAGCTGCTTTTGCGGACACAAAGAAGGATAAAATTTCAAGTGTCGAAAAGAGTAAGAAAAGAAAGCGGTTAGATAATAATCGCATCGAAAAGGGTCGAAAACCAAATGATGCAGATCATCAAGAAGTTCCCCCCAAAATTGGAACTTATGGTGCTATATCCTCTACAAAGGGTATTGAGAATTTTCAATGGATGAATGGATTACCTATGTACCCCAATTTTAATGGATATCCCATGCCACCTTTTTATTCATACAGTGGAGGTGGAACACCCATGTTTCAGATAAATCCATCACAAGCTAATGTACCAAATTACTACTATTATTGGAATGCAAGAGTTCAAGATTTGAAGAAGAAGAAGAATTAA 2400 0.3821 MVCNREGTRRKKYLEMENRKRDHRPITRVMCQARIGFHYDMKLRKWKVTAFEETHNHDLIPPKYIQFVPAYRVMTEADKAQANSLHDYGVRTCHIMGFMLKQKGGPGKIGFTKKDLYNHFDKSKRAKVKDGDAYAALSYLISKADEDPLLQGKFTLKDNKLENLVWADGASIIDYQCFSDVLAFDTTYQKNKYNKPLVVFSGTNHHGQTCIFGCGLLADEKHETYVLVLKMFLEIMGNKHPTAAVTDGDLAMRGAIREVMPNATHRLCAWYLHRNACEAIKNSEFLHGLKHLMYTGIFFRMSLKINGIAWTTSQCEGIHSLIKHYIGKKCYLLDLMHNLNEAVRQYRTNELLSDFKSLFSSPVLTTCFEDIEKEAANIFTHNMFKEVRNEILEASKQNVVGHSIDGNKIEVRMNKYQEPAIEYKVRYDRSTNNFACDCRLFESRGIPCSHIFCTMRHDHISTISNTLIHKRWTKDAKKEYISSLTAEDIESEKIAGVRYGALATLFFSLCDKASKHRDDFIEIREDIFGLIMKLHKRHNPNNKLPSTANLVGDPSVVKTKGAPRQTTKTAKARKCSHCKRIGHTVRRCPKLYGGECSLSSNEDKLNTDIDQSSTESNGVTDMSDEETIHQCNEKRSDLFENIQKKVNRPHVQSTKVQSNQYNDNRTEKPTAQTKINAPEAAFADTKKDKISSVEKSKKRKRLDNNRIEKGRKPNDADHQEVPPKIGTYGAISSTKGIENFQWMNGLPMYPNFNGYPMPPFYSYSGGGTPMFQINPSQANVPNYYYYWNARVQDLKKKKN* 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g1515 799 MobiDBLite consensus disorder prediction 602 625 - -
Ahy15g1515 799 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 18 294 IPR031052 GO:0006355
Ahy15g1515 799 PANTHER OS02G0262500 PROTEIN 18 294 - -
Ahy15g1515 799 MobiDBLite consensus disorder prediction 646 673 - -
Ahy15g1515 799 MobiDBLite consensus disorder prediction 541 569 - -
Ahy15g1515 799 SMART 26again6 434 461 IPR006564 GO:0008270
Ahy15g1515 799 ProSiteProfiles Zinc finger SWIM-type profile. 423 459 IPR007527 GO:0008270
Ahy15g1515 799 MobiDBLite consensus disorder prediction 644 724 - -
Ahy15g1515 799 MobiDBLite consensus disorder prediction 681 719 - -
Ahy15g1515 799 Pfam FAR1 DNA-binding domain 2 60 IPR004330 -
Ahy15g1515 799 SUPERFAMILY Retrovirus zinc finger-like domains 562 593 IPR036875 GO:0003676|GO:0008270
Ahy15g1515 799 Pfam MULE transposase domain 181 275 IPR018289 -
Ahy15g1515 799 PANTHER OS02G0262500 PROTEIN 314 522 - -
Ahy15g1515 799 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 314 522 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g1515 Ahy-Chr15 29388333 29391104 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy15g1515 MULE 4.20E-23 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g1515 - - ahf:112748201 1655.96