Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g1482 ATGGTTTTTGCTTTGCCTTTTGAGATAGCTTCAGTGCTACATAAAGTTCAGATCTTTCACCGTACTTTGCCTTCTTTACAGATGCTCTCTTCGACAAAGCAACCGGGGGAGAAAATTTCTTTTGGTCCTATTGTCGACGGGAACGATGCTGATGGGGAAGTGAATATTCAAAAAGTTAAGAGAAGGAGAAGGAGGAAAAGGCGAAGGGATAATGTGGATCTTGATGATGCTTTGCGCCTGCAGAGGAGAACAAGGTATCTGTTAATCAAAATGAAGGTAGAGCAGAACCTTATAGATGCATACTCTGGAGAAGGCTGGAAAGGTCAAAGTCGAGAAAAGATTAGACCGGAGAAGGAACTACAAAGAGCAAAGAAGCAGATTTTAAAATGTAAACTTGGCATTCGCGATGTCATTTGCCAGTTGGATGCTCTTAGTTCTGTGGGCAGGATTGAAGATTCCGTCATTGCTCCAGATGGATCTGTATATCATGAACATATATTCTGTGCAAAATGCAAGTTGCCTGAAGCATTCCCCGATAATGACATTATACTCTGCGACGGCACATGCAATCGTGCTTTTCACCAAAGATGTCTTGACCCACCGTTGGACACTGAAAATATTCCTCCTGGAGACCAATGCTGGTTTTGCAAGTTTTGTGAATGTAAGATGGAAATACTCGAGGCAACGAATGCTCATCTTGGGACCGACTTCTCCTTGGACAGTACATGGCAGGATGTATTCAAGGAAGAAGCTACTGTACCAGATGATTGTGCCGCTTTATTAAATCCGGAAGAAGAATGGCCGTCAGATGATCCAGAAGATGATGATTATAACCCGGACAGGAGAGAAAACACTCACAACATCAATGCAGAAGGCACTGATGAAAGTCCATCTGATTCAAGCAGCTCTATCAGTCTTTCGTCCTTAAACGATGAATATTCTCCTGTAGACAAAGCCATGAGCCTTGAATATCTTTCTGTTAATAGTTGCGTTGATTCTGATGGATACGGGGAAATAGTATGCAGCCGCAGGCAGCGTAAAGCAGTTGACTACAGGAAACTTTATGATGAAATGTTTAAGGATGCTCCTCCATGTGAACAAATGAGTGAAGATGAAGACTGGGGTCCTGGCAAAAGGAAGCGGAGAGAAAAGGAATCTGATGCTGCTAATACACTTATGACGCTGCACGAAAGCGATAATAAATTTCCGAATAATGAGAACAACGATACAGTGAGAGAGGGCGCGCACACACATGTAAAAAGATCTTGCTTCAGAATTCCACATCATGCAGTTGAGAAGCTTCGCCAAGTTTTCGCAGACAATGAACTTCCTCCGAGATCCGTGAAGGAACACATTTCAAAAGAGTTGGGAATTGATGCTGCAAAGGTTAGCAAGTGGTTTAAAAATGCTCGTTATTTAGCTCTTAAAACCAGGAAGCATCAAGTCGAAGGAGGAGAGCTGCCTTTGAGTTTGTTGTGCAAGACCTCGAAGGGTTCCAGTTTACAAATTGTGGACAAAGATGAGATTTTGCAGAAATCAAAGGCCTCTAAAATTGCGATGGTTCATTCACCGAATAATGGTAACGGTATTACCGATAGACAGAAAGTGAAGTCATCTTCTGGCAGTATTTGGAAAAAAAGGCAACCGGAAATATCTCCTGCTAAGACAGCAGAAAATGGCAACAAGGACTTGGAAGAAGGGAGTGATGATGTTGGCTTGAAGAAGCTGTTACAAGAAAAGAAAAGAAAGATGGAATTTGTGTTTGGAGGAGACTCTAAGGCAGCAGAGTTGGAATTTGAAAGACTTAGCAAATTGAAGGCTAAACTAGATAGCATGAAGGTTAAATTAATTGAAGTTCAAAACCATAGAGCAAAGGGTGCAAAGGAACCATGTGTTATATATGTGCCCACAGCTCAGCTAAGGGAAAAAGGTTGA 1935 0.4202 MVFALPFEIASVLHKVQIFHRTLPSLQMLSSTKQPGEKISFGPIVDGNDADGEVNIQKVKRRRRRKRRRDNVDLDDALRLQRRTRYLLIKMKVEQNLIDAYSGEGWKGQSREKIRPEKELQRAKKQILKCKLGIRDVICQLDALSSVGRIEDSVIAPDGSVYHEHIFCAKCKLPEAFPDNDIILCDGTCNRAFHQRCLDPPLDTENIPPGDQCWFCKFCECKMEILEATNAHLGTDFSLDSTWQDVFKEEATVPDDCAALLNPEEEWPSDDPEDDDYNPDRRENTHNINAEGTDESPSDSSSSISLSSLNDEYSPVDKAMSLEYLSVNSCVDSDGYGEIVCSRRQRKAVDYRKLYDEMFKDAPPCEQMSEDEDWGPGKRKRREKESDAANTLMTLHESDNKFPNNENNDTVREGAHTHVKRSCFRIPHHAVEKLRQVFADNELPPRSVKEHISKELGIDAAKVSKWFKNARYLALKTRKHQVEGGELPLSLLCKTSKGSSLQIVDKDEILQKSKASKIAMVHSPNNGNGITDRQKVKSSSGSIWKKRQPEISPAKTAENGNKDLEEGSDDVGLKKLLQEKKRKMEFVFGGDSKAAELEFERLSKLKAKLDSMKVKLIEVQNHRAKGAKEPCVIYVPTAQLREKG* 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g1482 644 MobiDBLite consensus disorder prediction 290 309 - -
Ahy15g1482 644 MobiDBLite consensus disorder prediction 521 546 - -
Ahy15g1482 644 MobiDBLite consensus disorder prediction 261 309 - -
Ahy15g1482 644 PANTHER POLYCOMB PROTEIN PCL 40 625 - -
Ahy15g1482 644 SUPERFAMILY FYVE/PHD zinc finger 159 225 IPR011011 -
Ahy15g1482 644 MobiDBLite consensus disorder prediction 364 387 - -
Ahy15g1482 644 ProSiteProfiles 'Homeobox' domain profile. 417 477 IPR001356 GO:0003677
Ahy15g1482 644 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 159 216 IPR013083 -
Ahy15g1482 644 SUPERFAMILY Homeodomain-like 420 481 IPR009057 -
Ahy15g1482 644 Coils Coil 602 622 - -
Ahy15g1482 644 Pfam PHD-finger 167 222 IPR019787 -
Ahy15g1482 644 PANTHER POLYCOMB-LIKE TRANSCRIPTION FACTOR 40 625 - -
Ahy15g1482 644 ProSitePatterns Zinc finger PHD-type signature. 168 219 IPR019786 -
Ahy15g1482 644 Gene3D - 419 483 - -
Ahy15g1482 644 ProSiteProfiles Zinc finger PHD-type profile. 165 222 IPR019787 -
Ahy15g1482 644 CDD PHD_PRHA_like 167 219 IPR045876 -
Ahy15g1482 644 SMART HOX_1 419 481 IPR001356 GO:0003677
Ahy15g1482 644 Pfam Homeodomain 427 472 IPR001356 GO:0003677
Ahy15g1482 644 SMART PHD_3 167 220 IPR001965 -
Ahy15g1482 644 MobiDBLite consensus disorder prediction 521 568 - -
Ahy15g1482 644 CDD homeodomain 420 481 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g1482 Ahy-Chr15 27966005 27971639 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g1482 67 481 Homeobox Transcription Factor Family AT4G29940 56.279 5.42e-148 446
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-PHD Ahy15g1482 Homeodomain 4.20E-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g1482 - - gmx:100816912 828.165