Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g1450 ATGGCTTTGAGGGCGGCTGCGGTTGCGGTTGCGGCGCAGCCTTCGTCGCGCAGTCTATGGCGGCTACTCTCGAGCCGTTCTGCTTATCCTCCGTCGGCTATTGCCGCAGCGTTTGCTCCACAAGCGGTGGAACCCAAATCCTCCCTCTTCGTTTCCGGGCTTAACAAACGGACGACATCTGAATGCCTACTCCAAGAATTTTCTAAGTTTGGCAAAGTTGTTCGCACTAGGGTGATGATCGATAGAGAAGGTTGTTCTAAAGGGTATGGTTTTGTACAATATGCCACTATAGAAGAGGCTGCAAAGGGCATCAAAAGCATGAATGGAAAGTTTTTGGATGGTTGGATTATATTTGTAGAGTATGCCAAATCTATCCCAGAACCTACGCAGCAATCTCACCGGTATCTCCGGCAGTAG 417 0.4964 MALRAAAVAVAAQPSSRSLWRLLSSRSAYPPSAIAAAFAPQAVEPKSSLFVSGLNKRTTSECLLQEFSKFGKVVRTRVMIDREGCSKGYGFVQYATIEEAAKGIKSMNGKFLDGWIIFVEYAKSIPEPTQQSHRYLRQ* 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g1450 138 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 49 114 IPR000504 GO:0003723
Ahy15g1450 138 Gene3D - 15 134 IPR012677 -
Ahy15g1450 138 SMART rrm1_1 48 120 IPR000504 GO:0003723
Ahy15g1450 138 SUPERFAMILY RNA-binding domain, RBD 37 135 IPR035979 GO:0003676
Ahy15g1450 138 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 47 124 IPR000504 GO:0003723
Ahy15g1450 138 PANTHER TRANSFORMER-2-RELATED 1 132 - -
Ahy15g1450 138 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN 3, MITOCHONDRIAL-LIKE 1 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g1450 Ahy-Chr15 26961870 26964597 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g1450 47 123 Eukaryotic Initiation Factors Gene Family AT4G34110 38.961 4.76e-12 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g1450 - - adu:107488830 192.586