Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g1445 ATGCCATTACCATATTCTAAAATGTATAGGCTTCACTCTCAAATCCACCAGAGTAATGGTGCTCCTATTCTTTCTCCATATTCTCCTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTATAGTTCTTCTAATTCAGCTTCTTCATCCTCAGATTCTTCATCTGGGAATAGTAGAATAAGCCCTGCAATTATTTTCATCATAGTAATTTTATCTGTTGTGTTCTTCATCTTGGGCACCCTCCACCTGCTTGTTAGATTTCTCATGAGACAAAGATCTTCTTCTTCCTCATCAATTTCTCAATCCAATAGGTATCCTGAAATGTCTGAATCTGATGCATACCAGAGACAGTTGCAGCAATTATTCCACCTCCATGACTCAGGTTTAGATCAGGCTTTCATTGATGCACTCCCTGTGTTTCTCTACAAGGAGATAATTGGCTTGAAGGAGCCATTTGATTGTGCTGTTTGCCTTTGTGAGTTCTTGGAACAAGACAAGTTGAGGTTGCTGCCAAATTGCAACCATGCTTTTCACATTGACTGCATTGACACATGGTTGCTTTCAAATTCAACTTGTCCCCTTTGTAGAGGGACACTTTATGCACCAGGGTTTTCATTTGAGACCCCATTTTTTGACTTTGAAGGTCCATGTTATGAGGACGAAGATGGTGTTTCAGTTTCAGGATTTGGTGTCGATGGTGCTGGTTCTTCTAACAAGCCTGCTGAGAATCACATAAGGAATGGGAAGAGGGTTTTTTCTGTGAGGCTTGGAAAATTCAGAAGCTCAAATAATAATGGAGTAGATGGTGTTGAAAAATGTGAAGGAGAGAGTAGTAATAGTAGTATTAGTTTTAGTAATAGTCATGGTAATTTGGATGCAAGGAGATGCTACTCAATGGGGTCTTACCAATATGTTGTTGCTGATTCTGATTTGAGAGTGGCTTTGTGTCCAAGCATCAGTGGCAGTATGAGACAATTGATTAAGGGAAGAATAGCTACAACAAATGGGAACAATTTTTCTTCAACTGATGTTGATGTTGTTGAAGGAAAAAAGATCAGCAATGCAAGAAAAGGTGAGAGCTTTTCTGTTTCCAAGATATGGCAATGGTCTAGGAAGGATAACAGTAAGTTAACAAGTTCATCAGAGGCTCGAATTCCATAA 1200 0.3892 MPLPYSKMYRLHSQIHQSNGAPILSPYSPPSSSSSSSSSSSSSSSSSSSSSSSYSSSNSASSSSDSSSGNSRISPAIIFIIVILSVVFFILGTLHLLVRFLMRQRSSSSSSISQSNRYPEMSESDAYQRQLQQLFHLHDSGLDQAFIDALPVFLYKEIIGLKEPFDCAVCLCEFLEQDKLRLLPNCNHAFHIDCIDTWLLSNSTCPLCRGTLYAPGFSFETPFFDFEGPCYEDEDGVSVSGFGVDGAGSSNKPAENHIRNGKRVFSVRLGKFRSSNNNGVDGVEKCEGESSNSSISFSNSHGNLDARRCYSMGSYQYVVADSDLRVALCPSISGSMRQLIKGRIATTNGNNFSSTDVDVVEGKKISNARKGESFSVSKIWQWSRKDNSKLTSSSEARIP* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g1445 399 CDD RING-H2_PA-TM-RING 166 209 - -
Ahy15g1445 399 MobiDBLite consensus disorder prediction 19 70 - -
Ahy15g1445 399 Pfam Ring finger domain 166 209 IPR001841 -
Ahy15g1445 399 SUPERFAMILY RING/U-box 146 215 - -
Ahy15g1445 399 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 8 397 - -
Ahy15g1445 399 SMART ring_2 167 208 IPR001841 -
Ahy15g1445 399 ProSiteProfiles Zinc finger RING-type profile. 167 209 IPR001841 -
Ahy15g1445 399 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 127 214 IPR013083 -
Ahy15g1445 399 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 8 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g1445 Ahy-Chr15 26657059 26660731 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g1445 62 395 C3H Transcription Factor Family AT2G18650 41.551 2.13e-58 194