Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g1433 ATGATCGGTAAAACAAATGGGTCGGGTCGCCGGATTCTTACTTTTCCGGCGGTTCATCCATGCGTGAATGTTTCTCTCTCTACCGTAATCTCTTCCCTCATAGTCCTCTCTCGCTCCATCTCGAGTTTCCAATGGAGAACCTTCCCTTGCAACAAGCGAAACGCGAGGAACGCCATTCGTTTGGTTCATCTTCTCCAACCTTTCATCGACGAGATCCGGGAAAACCAATCAGGACTTCCGGATTCGGCTACGCTTTCGTTTTCCGAGCTCCACTTGACCTTCCAGAAGCTTCTTTTCCTATTGGAAGATGCTGCACGTGAAGGTGCAAGGTTGACGATGTTGATGGAGTCGGATCGAGTCGCCACACAGTTTGTGGTTTTGTCACGATCAATTGCCACGGCTTTGGATGTTTTCCCTTTTGATTCTGTCGATGTGTCCGAGGAAGTTAGAGACCAGGTTGTGTTGTTGATGAGGCAAGCGAGGAATGCAGTGTTTGAAGTTGAGGTTGACGATAAAAAGGCTTTGACTTGTGTTAGGTCGGTTTTGACCAGGTTTGAGAACCGGGTTGAACCGAATGAGGGTGATCTAAGGTTGGTTCTTGATTATATTGGGGTTAGGAAGTGGAGTGAGTGTAACAAAGAGGTGAAGTTTCTTGCTGCTGAAATTGGGTTTCAGAGTAACAGTGAGGAGAAGTCAAAGGTTGGATTTTTATGTAGCTTGATGGGGTTCATGTGCTATTGTAGGTGCTTGGTGATGGAAGTTGTTGATGGTGAAGGTGGTAACAGCAACCCAAAACCTGAAGCCGGAAGAAAAATCAGTGTTGAAGATGAGAAAATTCTGAGTGGGCTCAACCCTGATGATTTTAGATGTCCAATCTCTCTAGAGCTGATGAGTGATCCAGTGACTATAGAAACAGGTCACACTTATGATCGTTCCTCAATTCTCAAATGGTTCAGGAGTGGGAATGCAATATGTCCCAAGACAGGTAAGAGGCTTATAAGCACGGAATTGGTCCCAAATTTGGTGCTTAAGAGGCTGATTCAGCAGCATTGCTATGTTAATGGCATTCCTTTTATTAGCGATTTGGGTAAAAGAAAGAGTAGCGACATCACTAGGACATTGCATCCAGGGAGTTTTGCTGCAGAGGGTGCCATGAAGATGCTGGCTAGTTCTCTCAGTGCCAGGCTTGAGAATGGAACAGCCATTGAAGAGAAAAACCGAGCCGCGTTTGAGATGAGGCTTCTTTCCAAAACAAGCATTTTTAATAGGTCTTGTTTGGTGGAAGCCGGTTCGGTTTCTCATTTGTTGAAGATGTTGTCACTTAGGGATTCGTCAGCGCAAGAGAATGCCATTGCAGCACTTCTGAACCTCTCAAAGTACCCCAAGAGTAGAGCTCTAATGGCTGAGAGTTTGGGGTTAGCACTCATTGTTCGGGTCCTGAAGAACGGGCTAAAGATTGAAGCTCGCCAGCACGCTGCCGCGGTGTTGTTCTACCTTGCATCAGATGCTGAGTATAGGAAACTGATAGGGGAGGAACCAGACGCAATTCCTTCATTGGTGAGGCTGATCAAAGATGGTTCGGATCGCACCAAAAAGAGCTTGGTTGCAATGTATGGCATCCTCATGAACCAACATGAGAACCATAAGAGGGTACTTGCTGCAGGGGCAATCCCTTTGCTTATTGACATATTAAGAACATGTGAGAAAGAAGATCTTCTCACAGATTCACTAGCAATTCTGGCAACTCTTGCAGAGAAGAGTGATGGAGCAATGGCGATTCTTCAATGGGGAGTTCTGCATATAGCTGTTCAGATTCTTAGTTCTTCCACTTCAAGGATGGGGAAGGAGCACTGTGTGACTCTGCTGCTTTCTCTATCAATGCATGGAGGAGTGGATGTGGTTGCTGATTTGGTAAAGAGCACTTCGCTTATGGGGTCCTTATATTCCCAACTCAGTGAAGGCACATCTAGAGCAAGCAAGAAGGCCAGTGCCCTCATCAAGGTCCTCCATGATTTTTCTGAAAGGAGGTCCTCTGGCTTCAAGCCTTCAGTTATTCCACAAGAACAATTTGTTCACGTGTGGTAA 2085 0.4595 MIGKTNGSGRRILTFPAVHPCVNVSLSTVISSLIVLSRSISSFQWRTFPCNKRNARNAIRLVHLLQPFIDEIRENQSGLPDSATLSFSELHLTFQKLLFLLEDAAREGARLTMLMESDRVATQFVVLSRSIATALDVFPFDSVDVSEEVRDQVVLLMRQARNAVFEVEVDDKKALTCVRSVLTRFENRVEPNEGDLRLVLDYIGVRKWSECNKEVKFLAAEIGFQSNSEEKSKVGFLCSLMGFMCYCRCLVMEVVDGEGGNSNPKPEAGRKISVEDEKILSGLNPDDFRCPISLELMSDPVTIETGHTYDRSSILKWFRSGNAICPKTGKRLISTELVPNLVLKRLIQQHCYVNGIPFISDLGKRKSSDITRTLHPGSFAAEGAMKMLASSLSARLENGTAIEEKNRAAFEMRLLSKTSIFNRSCLVEAGSVSHLLKMLSLRDSSAQENAIAALLNLSKYPKSRALMAESLGLALIVRVLKNGLKIEARQHAAAVLFYLASDAEYRKLIGEEPDAIPSLVRLIKDGSDRTKKSLVAMYGILMNQHENHKRVLAAGAIPLLIDILRTCEKEDLLTDSLAILATLAEKSDGAMAILQWGVLHIAVQILSSSTSRMGKEHCVTLLLSLSMHGGVDVVADLVKSTSLMGSLYSQLSEGTSRASKKASALIKVLHDFSERRSSGFKPSVIPQEQFVHVW* 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g1433 694 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 18 4 683 - -
Ahy15g1433 694 Gene3D - 380 538 IPR011989 -
Ahy15g1433 694 Gene3D - 539 669 IPR011989 -
Ahy15g1433 694 Pfam U-box domain 285 350 IPR003613 GO:0004842|GO:0016567
Ahy15g1433 694 PANTHER U BOX DOMAIN-CONTAINING 4 683 - -
Ahy15g1433 694 SMART arm_5 460 501 IPR000225 GO:0005515
Ahy15g1433 694 SMART arm_5 418 459 IPR000225 GO:0005515
Ahy15g1433 694 SMART arm_5 543 585 IPR000225 GO:0005515
Ahy15g1433 694 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 284 356 IPR013083 -
Ahy15g1433 694 CDD RING-Ubox_PUB 288 330 IPR045210 -
Ahy15g1433 694 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 555 598 IPR000225 GO:0005515
Ahy15g1433 694 SMART Ubox_2 287 350 IPR003613 GO:0004842|GO:0016567
Ahy15g1433 694 SUPERFAMILY ARM repeat 399 669 IPR016024 -
Ahy15g1433 694 SUPERFAMILY RING/U-box 276 358 - -
Ahy15g1433 694 ProSiteProfiles U-box domain profile. 283 357 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g1433 Ahy-Chr15 26047131 26049552 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g1433 1 694 U-box Gene Family AT1G60190 47.383 0.0 582
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g1433 - - gmx:100795816 878.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g1433 15 26047131 26049552 Ahy15g1433 15 26047131 26049552 ECH