Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g1421 ATGTACGGTTCACAAAAAAAACAGTCTACTCCGGTGAGAGGCTACTATGGAGGTTACGTGAGATCACCTTCAGAGCTACAACAAATGAGTGGGGGTATAATGGCTTATAGCTACGAAGAAATCGTGGAAGTAACGAACGGGTTTTCGAGTGAGAACGTAATAGGAGAAGGTGGGTTCGGGAGTGTGTACAAGGCTTTAATGCCCGATGGTAGAGTAGGAGCAGTGAAGATGCTGAAACCTGGTAGTGGCCAAGGAGAGAGAGAGTTTAGGGCTGAGGTTGACATTATTAGTAGGATTCATCATCGTCATTTGGTTTCTTTGATTGGTTATTGCATAGCTGAGCAACATAGAGTTCTTGTCTATGAGTTTGTTCCTAATGGGAATCTCAGTCAGCACTTGCATGGAAATAACTTACCTGTTTTGGATTGGCCGAATAGGATGAAGATAGCAAATGGCGCTGCAAGGGGCATAGCGTATCTGCATGAGGGCTGCAACCCAAGGATTATTCATAGGGATATTAAGTCCGCAAACATACTTTTGGATGGTGCTTACGAAGCACAGGTTGCAGACTTTGGACTTGCCAAACTAACTGATGACGCTAACACCCATGTATCAACCAGGGTGATGGGGACCTTCGGATACATGGCTCCAGAGTATGCAACAAGTGGAAAATTAACGGATAGATCAGATGTTTTCTCATTTGGAGTTGTCCTGCTTGAGCTCATAACTGGAAGGAAGCCCGTTGATCCAAAGCGGCCCATCGGAGAAGAGAGTTTGGTTGAGTGGGCTCGTCCACATCTTCTTCTTGCAATGGGGACGCGTGCGTTTGGTGATCTAGAAGACCCAAGGCTTCAAGGACGCTATGTTCATTCTGAAATGTTAATCATGATTGAGGCTGCTGCCGCATGTGTTCGCCACTCTGCTCCTAAACGCCCCCGTATGGTTCAGGTGGCAAGAGCCTTAGAGTGTGGAGAACAACTAGATCTATCAAATGGGGTGAAATATGGTCAAAGCAGAATATATGATTCAAGCCAGTACATTAATGATATTATGAGATTTAGAAGGATGATGGCTGATGGCAATTTTAGCGGTTACGACTATGATATGTATAGTACAGAACACAGTTCAAGAGAGTTGTCTCCTTCTTTAGGGATGCCAACTAGTTCAGGTGGTAATTCAGAACCTAGATCTTTCAACAACCATAGGAGCTTCTCTGAGTCTGAGCAACCATAA 1233 0.4469 MYGSQKKQSTPVRGYYGGYVRSPSELQQMSGGIMAYSYEEIVEVTNGFSSENVIGEGGFGSVYKALMPDGRVGAVKMLKPGSGQGEREFRAEVDIISRIHHRHLVSLIGYCIAEQHRVLVYEFVPNGNLSQHLHGNNLPVLDWPNRMKIANGAARGIAYLHEGCNPRIIHRDIKSANILLDGAYEAQVADFGLAKLTDDANTHVSTRVMGTFGYMAPEYATSGKLTDRSDVFSFGVVLLELITGRKPVDPKRPIGEESLVEWARPHLLLAMGTRAFGDLEDPRLQGRYVHSEMLIMIEAAAACVRHSAPKRPRMVQVARALECGEQLDLSNGVKYGQSRIYDSSQYINDIMRFRRMMADGNFSGYDYDMYSTEHSSRELSPSLGMPTSSGGNSEPRSFNNHRSFSESEQP* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g1421 410 SUPERFAMILY Protein kinase-like (PK-like) 24 321 IPR011009 -
Ahy15g1421 410 Pfam Protein tyrosine and serine/threonine kinase 51 249 IPR001245 GO:0004672|GO:0006468
Ahy15g1421 410 SMART serkin_6 48 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy15g1421 410 Gene3D Phosphorylase Kinase; domain 1 19 123 - -
Ahy15g1421 410 PANTHER RECEPTOR-LIKE KINASE 20 388 - -
Ahy15g1421 410 ProSitePatterns Serine/Threonine protein kinases active-site signature. 168 180 IPR008271 GO:0004672|GO:0006468
Ahy15g1421 410 Gene3D Transferase(Phosphotransferase) domain 1 124 336 - -
Ahy15g1421 410 MobiDBLite consensus disorder prediction 376 410 - -
Ahy15g1421 410 ProSiteProfiles Protein kinase domain profile. 48 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy15g1421 410 CDD STKc_IRAK 54 322 - -
Ahy15g1421 410 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 20 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g1421 Ahy-Chr15 25197946 25201080 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g1421 17 378 Trihelix Transcription Factor Family AT1G70460 64.384 1.58e-163 474
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Ahy15g1421 PK_Tyr_Ser-Thr 3.10E-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g1421 - - lja:Lj2g3v1414850.1 588.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g1421 15 25197946 25201080 Ahy3g3430 3 133042194 133046232 hybridization