Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g1380 ATGATCACAAAAATGATTAAAACAATCCTTCTCATCCCTTCTCAATTCATTATTTTCCTTCTCATCAACTCAGTACTACTCTCAGACACTGTAATGGCAGAACCAAGGGCAAGAACAATCCAAATAGCATGTGGTCATCAACTAGAGCACAATAGCACCATCTATGTTCCGAATTTCGTTGCAACCATGGAGAAAATCAGTGAACAGATGCGAAGTACCGGCTTTGGAACAACAGTTACAGGGACAGGACTTGATACTAACTATGGCCTAGCTCAGTGCTATGGAGATCTTTCATTGCTTGATTGTGTGCTATGTTATGCTGAGGCAAGGACGGTTCTTCCTCAGTGCTTCCCTTTCAATGGTGGCCGCATTTACCTCGATGGTTGCTTCATGAGGGCCGAGAATTATAGCTTCTTTGATGAGTATACAGGAGCAGGAGATAATGCAGTGTGTGGGAACAGAACAAGGAAGAACTCAAGTTTTCAAGAATCTGCAAAGCAAGCAATTCTAACAGCAGTTCAAGATGCACTTAGCAATAAAGGATATGCTAGAGGGAAGGTCGCCGTGGCCGGAACGGTTAATGAGTCTGCTTATGTGCTGGCTGATTGTTGGAGGACTTTGAACACAAGCTCTTGTAAAGCATGTCTTCAGAATGCATCAGCTTCTCTGTTGGGATGCTTGCCTTGGGAAGAAGGCCGCGCGCTTAACACCGGTTGCTTCATGAGGTTCTCAGACAAAGATTTCCTCAACAAGCAGCAGGAAAATGGAAGCTCAAAGGGTAATGTAATAGTTCTGGTGGTTGCAGTGGTTAGTTCATTGATTGTTTTTGTGGTTGGAATAGCTATTGGGATATATATCTTGAAACTTAGATACATTCAAAAGAAAAGAAGAGGTTCATATGATACAGAAAAGCTAGCAAAGTCCCTTCGCCGCAGTAGCCTGAATTTCAAGTACACTTCACTGGAAAGGGCTACTGGATCCTTTGATGAGACTAACAAGTTAGGACAAGGAGGGTTTGGAACAGTTTACAAAGGAGTTCTACCTGATGGAAGAGAGATTGCTATCAAGAGGCTATATTTCAATAACAAACATAGAGCAGGAGATTTCTACAATGAAGTGAACATAATCAGTAGCGTGGAACACAAGAATCTAGTCCGACTGTTAGGATGCAGTTGTTCAGGACCCGAAAGCCTGCTTGTGTATGAATATCTGCCCAACAGAAGTCTCGATCGCTTCATTTTTGACAAGAATAAGGGAAGAGAACTGAACTGGGAGAAGAGATACGAAATCATCATTGGGACAGCTGAAGGATTAGCATACCTACATGAGAATTCTAAAACCAAAATAATTCACAGAGATATAAAAGCCAGCAACATCCTCTTGGATGCAAAGCTTCGTGCTAAAATCGCAGATTTTGGCTTGGCTAGATCCTTTCAAGAAGATAAGAGCCATATAAGTACAGCTATTGCAGGAACTTTGGGTTATATGGCTCCAGAGTACATAGCTCATGGTCAGTTAACAGAAAAGGCAGATGTGTATAGTTTTGGAGTGCTACTGCTAGAGATAGTTACCGGGAGACAGAACAACAGGAGCAAAGCAGCTGAATATTCAGACAGCCTAATTACAGTGGCATGGAAACACTTTCAGTCAGGGACAGCTGAACAATTATTTGATCCAAATCTTCAGTTGCATGACGACTACAACAACAGCAGTGTTAAGAATGAGATCTTAAGAGTGGTTCAAATAGGACTTCTATGCACCCAAGAGAACCATTTGTTGCGGCCAACTATGTCAAAAGTGCTGCAGATGCTAACAAAGAAGGAGGAGCAACTTGTTGCTCCTTCTAATCCACCTTTCCTAGATGAGAATACCATGGAATTCTGTGACATAAGTGGTGACCCATTTTTCCCTCTCGTTGCAGATGACTCGGTCGCTACCATGTCCCATAGCTCTTTTCATCCCAGGTGA 1968 0.4243 MITKMIKTILLIPSQFIIFLLINSVLLSDTVMAEPRARTIQIACGHQLEHNSTIYVPNFVATMEKISEQMRSTGFGTTVTGTGLDTNYGLAQCYGDLSLLDCVLCYAEARTVLPQCFPFNGGRIYLDGCFMRAENYSFFDEYTGAGDNAVCGNRTRKNSSFQESAKQAILTAVQDALSNKGYARGKVAVAGTVNESAYVLADCWRTLNTSSCKACLQNASASLLGCLPWEEGRALNTGCFMRFSDKDFLNKQQENGSSKGNVIVLVVAVVSSLIVFVVGIAIGIYILKLRYIQKKRRGSYDTEKLAKSLRRSSLNFKYTSLERATGSFDETNKLGQGGFGTVYKGVLPDGREIAIKRLYFNNKHRAGDFYNEVNIISSVEHKNLVRLLGCSCSGPESLLVYEYLPNRSLDRFIFDKNKGRELNWEKRYEIIIGTAEGLAYLHENSKTKIIHRDIKASNILLDAKLRAKIADFGLARSFQEDKSHISTAIAGTLGYMAPEYIAHGQLTEKADVYSFGVLLLEIVTGRQNNRSKAAEYSDSLITVAWKHFQSGTAEQLFDPNLQLHDDYNNSSVKNEILRVVQIGLLCTQENHLLRPTMSKVLQMLTKKEEQLVAPSNPPFLDENTMEFCDISGDPFFPLVADDSVATMSHSSFHPR* 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g1380 655 ProSiteProfiles Gnk2-homologous domain profile. 37 138 IPR002902 -
Ahy15g1380 655 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 14 634 - -
Ahy15g1380 655 ProSitePatterns Protein kinases ATP-binding region signature. 334 356 IPR017441 GO:0005524
Ahy15g1380 655 ProSiteProfiles Protein kinase domain profile. 328 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy15g1380 655 Gene3D Phosphorylase Kinase; domain 1 290 403 - -
Ahy15g1380 655 ProSiteProfiles Gnk2-homologous domain profile. 143 248 IPR002902 -
Ahy15g1380 655 ProSitePatterns Serine/Threonine protein kinases active-site signature. 449 461 IPR008271 GO:0004672|GO:0006468
Ahy15g1380 655 Pfam Salt stress response/antifungal 53 136 IPR002902 -
Ahy15g1380 655 Pfam Salt stress response/antifungal 154 245 IPR002902 -
Ahy15g1380 655 Gene3D - 37 138 IPR038408 -
Ahy15g1380 655 Gene3D - 148 248 IPR038408 -
Ahy15g1380 655 Pfam Protein tyrosine and serine/threonine kinase 331 603 IPR001245 GO:0004672|GO:0006468
Ahy15g1380 655 Gene3D Transferase(Phosphotransferase) domain 1 404 616 - -
Ahy15g1380 655 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 2 14 634 - -
Ahy15g1380 655 CDD STKc_IRAK 334 606 - -
Ahy15g1380 655 SMART serkin_6 328 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy15g1380 655 SUPERFAMILY Protein kinase-like (PK-like) 312 626 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g1380 Ahy-Chr15 23599462 23602689 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g1380 31 655 Receptor kinase-like Gene Family AT1G70520 68.102 0.0 870
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ahy15g1380 PK_Tyr_Ser-Thr 4.30E-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g1380 - - gmx:100305420 1057.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g1380 15 23599462 23602689 Ahy15g1380 15 23599462 23602689 ECH
Ahy15g1380 15 23599462 23602689 Ahy3g3400 3 132736133 132740326 hybridization
Ahy5g1250 5 33919166 33922610 Ahy15g1380 15 23599462 23602689 PCT
Ahy15g1380 15 23599462 23602689 Ahy5g1247 5 33885091 33888271 PCT