Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g1364 ATGATGAAGAACACCATGGCTTCTTTTACTCATCAACTCCCTCTTCTGCTTACCTTTGTGGCATCATTTGCATTTGTTCTTACCACAACTAGTGTGTTCTCATCGAAAGTTTCAATGAAAGAAACAATTTTGGAACCTTTCAAGTGCTCCACAAACATAAAAACATGCAATGCCTCACTCTACCACATAACCTACGGTGATAATGATGATGACCAAACCATACAACATTACATATCTTCCAATTACACAAACTCCTCCCAAATCAGACCAATCACACGTGGCACAAGACAAGACCACCTCATAACAGTGCCTTGTTCATGCAGAAACAACAACAACCTCACCGGTTATTACTATGACACAACCTACACTGTGAAGCCAAATGATAATTTCTATGACATTAATAACTTTGTTTACAGTGGTCAAGCGATGCTTATAAATGGTGTTTTGTACCCGGGTCAGAAACTGAGTATTCATATTCCTTGTGGGTGTTCAGAAATTGAGTCACAAATTGTTGTGACTTACACGGTTCAAAGAAATGATACCTCATCTGAAATAGCTAAGCTTTTGAATTCTACGGTTGCTGAGATGGAGAGTGTGAATCATCTTTTGGATCAGAACCCATCATACATAGATGTGGGTTGGGTTTTGTTTGTTCCTAGCCATTTTAATGGAATTCCACTGCCTCCAACAAAAGAAAAGAAACCAAAGTGGCAGATAATCATTGGGGTCTTAGTGAGTGTGACATTACTTTCAGTGATTGCCGTCATCTTTCTCATTCTCAGGAGAAATAGGGATACCGCAGCATCCGCCACAAATAATCCAAAAAGTGTCACTAAAAGATCAATTTCCAAAAAGAACTCTGACATTCATAAAGAATACATGCAAGTAAATGTTGGTGCAGATGCTACATCATTTGAGTCAGAAAGACCAGTAATTTACTCAATTGAGGAGATAGAAGATGCCACAAATAACTTCGATGAAAACAGAAGAATTGGGGTTGGTGGATATGGCAGTGTATATTTTGGAATGTTAGGCCACAAGGAGGTTGCTGTGAAGAAGATGAAGTCCAATAAATCCAAGGAGTTCTTCGCAGAACTCAAGGCCTTATGTAAGATCCATCACATAAACATTGTGGAGTTGTTAGGGTATGCAAGTGGAGATGACCACCTTTATTTGGTGTATGAGTATGTTGCAAATGGATCTCTGAGTGATCATCTTCATGATCCTTTACTTAAAGGACATCAGGCTCTATCTTGGTGTGCTAGGACTCAGATTGCATTGGATGCAGCAAAAGGAATTGAATACATACATGATTACACAAAAGCACAATATGTTCACCGTGATATAAAGACTACTAACATTCTTCTTGATCAGAAACTCAGAGCCAAGGTAGCAGATTTTGGCCTTGCAAAACTGGTGGAACGGACAAATGATGAAGAATTCATTGCAACAAGGCTTGTTGGAACACCAGGCTACCTTCCACCTGAATCTGTGAAAGAATTACAAGTGACCATAAAAACGGATGTGTTTGCATTTGGAGTAGTTCTATCAGAGCTGATAACAGGAAAACGTGCGCTATTTCGTGACAGCCAAAAACCCAATCAAATGGAATCTCTTATTTCACTTGTTAAGAAAATATTCCAAGATAATGATCCCGTCACTGCTTTAGAAAATGTTACAGATATGAATCTTCAACATAACTATCCTATAGACGGTATCTACAAGATGGGAGAAATAGCAGAGTGGTGCATGAGGGAGGAACCAATGGAGAGGCCTGAAATGAAGGAGATAGTTGGCGCGTTGTCACAGATAGTTATGACATCCATCGAGTGGGAAGCATCGCTCGGAGGAGATAGCCAAGTTTTCAGCGGCGTATTTATTGGAAGATAA 1890 0.3952 MMKNTMASFTHQLPLLLTFVASFAFVLTTTSVFSSKVSMKETILEPFKCSTNIKTCNASLYHITYGDNDDDQTIQHYISSNYTNSSQIRPITRGTRQDHLITVPCSCRNNNNLTGYYYDTTYTVKPNDNFYDINNFVYSGQAMLINGVLYPGQKLSIHIPCGCSEIESQIVVTYTVQRNDTSSEIAKLLNSTVAEMESVNHLLDQNPSYIDVGWVLFVPSHFNGIPLPPTKEKKPKWQIIIGVLVSVTLLSVIAVIFLILRRNRDTAASATNNPKSVTKRSISKKNSDIHKEYMQVNVGADATSFESERPVIYSIEEIEDATNNFDENRRIGVGGYGSVYFGMLGHKEVAVKKMKSNKSKEFFAELKALCKIHHINIVELLGYASGDDHLYLVYEYVANGSLSDHLHDPLLKGHQALSWCARTQIALDAAKGIEYIHDYTKAQYVHRDIKTTNILLDQKLRAKVADFGLAKLVERTNDEEFIATRLVGTPGYLPPESVKELQVTIKTDVFAFGVVLSELITGKRALFRDSQKPNQMESLISLVKKIFQDNDPVTALENVTDMNLQHNYPIDGIYKMGEIAEWCMREEPMERPEMKEIVGALSQIVMTSIEWEASLGGDSQVFSGVFIGR* 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g1364 629 CDD LysM 172 218 IPR018392 -
Ahy15g1364 629 ProSiteProfiles LysM domain profile. 172 218 IPR018392 -
Ahy15g1364 629 PANTHER LYSM-DOMAIN PROTEIN KINASE FAMILY PROTEIN-RELATED 27 629 - -
Ahy15g1364 629 SMART LysM_2 173 219 IPR018392 -
Ahy15g1364 629 Gene3D Transferase(Phosphotransferase) domain 1 397 614 - -
Ahy15g1364 629 Pfam Protein kinase domain 326 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy15g1364 629 ProSitePatterns Serine/Threonine protein kinases active-site signature. 444 456 IPR008271 GO:0004672|GO:0006468
Ahy15g1364 629 PIRSF TyrPK_CSF1-R 331 412 - -
Ahy15g1364 629 PIRSF TyrPK_CSF1-R 38 135 - -
Ahy15g1364 629 PIRSF TyrPK_CSF1-R 564 618 - -
Ahy15g1364 629 PIRSF TyrPK_CSF1-R 414 525 - -
Ahy15g1364 629 SUPERFAMILY LysM domain 172 219 IPR036779 -
Ahy15g1364 629 Gene3D Phosphorylase Kinase; domain 1 303 396 - -
Ahy15g1364 629 Pfam LysM domain 174 219 IPR018392 -
Ahy15g1364 629 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 27 629 IPR044812 GO:0019199|GO:0045087
Ahy15g1364 629 ProSiteProfiles Protein kinase domain profile. 325 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy15g1364 629 SUPERFAMILY Protein kinase-like (PK-like) 307 601 IPR011009 -
Ahy15g1364 629 ProSitePatterns Protein kinases ATP-binding region signature. 331 353 IPR017441 GO:0005524
Ahy15g1364 629 Gene3D LysM domain 163 223 IPR036779 -
Ahy15g1364 629 SMART serkin_6 325 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g1364 Ahy-Chr15 22951608 22956719 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g1364 305 629 Receptor kinase-like Gene Family AT1G51940 51.057 1.08e-113 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Ahy15g1364 Pkinase 1.30E-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g1364 - - gmx:100800907 825.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g1364 15 22951608 22956719 Ahy3g3389 3 132647359 132650632 hybridization
Ahy15g1364 15 22951608 22956719 Ahy15g1364 15 22951608 22956719 PCT
Ahy3g3389 3 132647359 132650632 Ahy15g1364 15 22951608 22956719 PCT