Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g1337 ATGCACAAACTTGATCCAGGAAGTCAGCAATTTGAATTCTCAGAAAATACAAATCAGATTGGTTCTTCATGTTTAGAAAATGAACAAAAGGTGCTAATCAGTATGAAGAATAGCACCGTCTTTGATGAAAAGTTACATCAAGGTTCTGATAATATGAGAGGGAATTCTCTTATTCAACTATCTGCTCCTCCTCAATATGTTTTGGTAAAGAGTTCTCAGATTGGAGAAGGTTCTTGCGATAAAAAAGTTACTGTCGAGCCAGAACTGGCCTTTCGAGATTTATCTGATTATAACTCACAAAGGAAATCTCAACCAGCCTCCCAAAATGTTCAAAATGGATCCGTAGAATCAACTAACTCAATAAGTAGCCTTTTTGTTCAGGATCAAATGCAGCCGAGTCCTGCACAAGAGAACATGAGCTCAGTGATTGAACACTTGGACCTGCCTACTGGGGATGTTGCAGGAAATGATGGTCCTAACTGTTTGCAAAGAAAGTCTAAAAGGCTGACTCAAATGAGGTTAAAGTCGGAGGACGGCAGAACTCCAAAATTACTCAAGGGAAAATATACACTCAGGTCTTCGAGAAGCAGTGACAGAGCTTTGCAGTCGCAGACTCGAGAAAAATGTAAAGTGCCTGAACTAAGTAGCGACTTGATTGATGTTAAAAATGTTGGAGAGAAAAAGAGAAGAGGGAGGAAGAGAAAACAGTGGGGAGGAGAGGGGATTATTGATGAATTTTCAAGAATAAGGAGTCACTTACGATATTTATTGAACAGAGTAAGCTATGAGCAGAGCTTGATTGATGCTTATTCTGGCGAGGGCTGGAAAGGATACAGCATTGAAAAATTAAAGCCTGAGAAGGAGCTTCAACGAGCTAAGTCTGAAATTCTTAGGAGAAAATTGAAAATTAGGGATCTATTTTGGAATTTGGGTTTATTGTGTGCTGAAGGAAAGCTTCCAGAGTCTTTGTTTGATTCCGAAGGAGCAATACGCAGTGACGATATTTTCTGTGCAAAATGCGGGTCCAAAGAGCTGACCACTGATAATGATATAATTCTCTGTGATGGTGCTTGTGACCGTGGATTTCACCAATGCTGTTTAAGTCCTCCATTGTTAACTAAAGACATTCCGCCGGGCCATGATATTTGGCTATGCCCAGGATGTAACTGCAAACTTGAATGCATTAAACTTCTTAATGACTTCTTAGGAACAAGTCTTTCTATTAGGGACACCTGGGAGCGGGTTTTTCCTGAAGCAACAGAGGCTGCTGGAACCAATGCGGGCCATAGCCTGGGACTTCCTTCAGTTGATTCTGATGACAACGATTACAAGCCTAAAGCTCCAGAAGATGAAGAGGATGAAGGTGGAGAATCAAGCTCTGATGGATCTGATTATGCTTCTGATTCTGAGAAATTGAAAGATTTGCATTCAGAGGATGATGATTATGATCCAAATGCTCCAGATACTGATAGGGAAGCCTCTGAAGAAAATTCAAGCTCTGGTTTCATTTCTGATGACACTGTGGACGAAGCTCAAATGCTTGCACCACAGGATGATATTATGAAGTGTAAAAGCTCTCGCAGTAAAAAGTTCAAAGTTGGTTAG 1605 0.4062 MHKLDPGSQQFEFSENTNQIGSSCLENEQKVLISMKNSTVFDEKLHQGSDNMRGNSLIQLSAPPQYVLVKSSQIGEGSCDKKVTVEPELAFRDLSDYNSQRKSQPASQNVQNGSVESTNSISSLFVQDQMQPSPAQENMSSVIEHLDLPTGDVAGNDGPNCLQRKSKRLTQMRLKSEDGRTPKLLKGKYTLRSSRSSDRALQSQTREKCKVPELSSDLIDVKNVGEKKRRGRKRKQWGGEGIIDEFSRIRSHLRYLLNRVSYEQSLIDAYSGEGWKGYSIEKLKPEKELQRAKSEILRRKLKIRDLFWNLGLLCAEGKLPESLFDSEGAIRSDDIFCAKCGSKELTTDNDIILCDGACDRGFHQCCLSPPLLTKDIPPGHDIWLCPGCNCKLECIKLLNDFLGTSLSIRDTWERVFPEATEAAGTNAGHSLGLPSVDSDDNDYKPKAPEDEEDEGGESSSDGSDYASDSEKLKDLHSEDDDYDPNAPDTDREASEENSSSGFISDDTVDEAQMLAPQDDIMKCKSSRSKKFKVG* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g1337 534 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 328 385 IPR013083 -
Ahy15g1337 534 MobiDBLite consensus disorder prediction 515 534 - -
Ahy15g1337 534 ProSitePatterns Zinc finger PHD-type signature. 337 388 IPR019786 -
Ahy15g1337 534 PANTHER HOMEOBOX PROTEIN HAT3.1 119 506 - -
Ahy15g1337 534 SUPERFAMILY FYVE/PHD zinc finger 329 396 IPR011011 -
Ahy15g1337 534 SMART PHD_3 336 389 IPR001965 -
Ahy15g1337 534 MobiDBLite consensus disorder prediction 96 115 - -
Ahy15g1337 534 MobiDBLite consensus disorder prediction 148 184 - -
Ahy15g1337 534 PANTHER POLYCOMB-LIKE TRANSCRIPTION FACTOR 119 506 - -
Ahy15g1337 534 MobiDBLite consensus disorder prediction 423 510 - -
Ahy15g1337 534 MobiDBLite consensus disorder prediction 464 495 - -
Ahy15g1337 534 ProSiteProfiles Zinc finger PHD-type profile. 334 391 IPR019787 -
Ahy15g1337 534 MobiDBLite consensus disorder prediction 170 184 - -
Ahy15g1337 534 CDD PHD_PRHA_like 336 388 IPR045876 -
Ahy15g1337 534 Pfam PHD-finger 336 391 IPR019787 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g1337 Ahy-Chr15 22053364 22064370 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g1337 244 472 Homeobox Transcription Factor Family AT3G19510 59.091 4.94e-88 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Ahy15g1337 PHD 5.00E-09 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g1337 - - adu:107488674 1021.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g1337 15 22053364 22064370 Ahy15g1337 15 22053364 22064370 ECH