Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ahy15g1337 | ATGCACAAACTTGATCCAGGAAGTCAGCAATTTGAATTCTCAGAAAATACAAATCAGATTGGTTCTTCATGTTTAGAAAATGAACAAAAGGTGCTAATCAGTATGAAGAATAGCACCGTCTTTGATGAAAAGTTACATCAAGGTTCTGATAATATGAGAGGGAATTCTCTTATTCAACTATCTGCTCCTCCTCAATATGTTTTGGTAAAGAGTTCTCAGATTGGAGAAGGTTCTTGCGATAAAAAAGTTACTGTCGAGCCAGAACTGGCCTTTCGAGATTTATCTGATTATAACTCACAAAGGAAATCTCAACCAGCCTCCCAAAATGTTCAAAATGGATCCGTAGAATCAACTAACTCAATAAGTAGCCTTTTTGTTCAGGATCAAATGCAGCCGAGTCCTGCACAAGAGAACATGAGCTCAGTGATTGAACACTTGGACCTGCCTACTGGGGATGTTGCAGGAAATGATGGTCCTAACTGTTTGCAAAGAAAGTCTAAAAGGCTGACTCAAATGAGGTTAAAGTCGGAGGACGGCAGAACTCCAAAATTACTCAAGGGAAAATATACACTCAGGTCTTCGAGAAGCAGTGACAGAGCTTTGCAGTCGCAGACTCGAGAAAAATGTAAAGTGCCTGAACTAAGTAGCGACTTGATTGATGTTAAAAATGTTGGAGAGAAAAAGAGAAGAGGGAGGAAGAGAAAACAGTGGGGAGGAGAGGGGATTATTGATGAATTTTCAAGAATAAGGAGTCACTTACGATATTTATTGAACAGAGTAAGCTATGAGCAGAGCTTGATTGATGCTTATTCTGGCGAGGGCTGGAAAGGATACAGCATTGAAAAATTAAAGCCTGAGAAGGAGCTTCAACGAGCTAAGTCTGAAATTCTTAGGAGAAAATTGAAAATTAGGGATCTATTTTGGAATTTGGGTTTATTGTGTGCTGAAGGAAAGCTTCCAGAGTCTTTGTTTGATTCCGAAGGAGCAATACGCAGTGACGATATTTTCTGTGCAAAATGCGGGTCCAAAGAGCTGACCACTGATAATGATATAATTCTCTGTGATGGTGCTTGTGACCGTGGATTTCACCAATGCTGTTTAAGTCCTCCATTGTTAACTAAAGACATTCCGCCGGGCCATGATATTTGGCTATGCCCAGGATGTAACTGCAAACTTGAATGCATTAAACTTCTTAATGACTTCTTAGGAACAAGTCTTTCTATTAGGGACACCTGGGAGCGGGTTTTTCCTGAAGCAACAGAGGCTGCTGGAACCAATGCGGGCCATAGCCTGGGACTTCCTTCAGTTGATTCTGATGACAACGATTACAAGCCTAAAGCTCCAGAAGATGAAGAGGATGAAGGTGGAGAATCAAGCTCTGATGGATCTGATTATGCTTCTGATTCTGAGAAATTGAAAGATTTGCATTCAGAGGATGATGATTATGATCCAAATGCTCCAGATACTGATAGGGAAGCCTCTGAAGAAAATTCAAGCTCTGGTTTCATTTCTGATGACACTGTGGACGAAGCTCAAATGCTTGCACCACAGGATGATATTATGAAGTGTAAAAGCTCTCGCAGTAAAAAGTTCAAAGTTGGTTAG | 1605 | 0.4062 | MHKLDPGSQQFEFSENTNQIGSSCLENEQKVLISMKNSTVFDEKLHQGSDNMRGNSLIQLSAPPQYVLVKSSQIGEGSCDKKVTVEPELAFRDLSDYNSQRKSQPASQNVQNGSVESTNSISSLFVQDQMQPSPAQENMSSVIEHLDLPTGDVAGNDGPNCLQRKSKRLTQMRLKSEDGRTPKLLKGKYTLRSSRSSDRALQSQTREKCKVPELSSDLIDVKNVGEKKRRGRKRKQWGGEGIIDEFSRIRSHLRYLLNRVSYEQSLIDAYSGEGWKGYSIEKLKPEKELQRAKSEILRRKLKIRDLFWNLGLLCAEGKLPESLFDSEGAIRSDDIFCAKCGSKELTTDNDIILCDGACDRGFHQCCLSPPLLTKDIPPGHDIWLCPGCNCKLECIKLLNDFLGTSLSIRDTWERVFPEATEAAGTNAGHSLGLPSVDSDDNDYKPKAPEDEEDEGGESSSDGSDYASDSEKLKDLHSEDDDYDPNAPDTDREASEENSSSGFISDDTVDEAQMLAPQDDIMKCKSSRSKKFKVG* | 535 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ahy15g1337 | 534 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 328 | 385 | IPR013083 | - | |
Ahy15g1337 | 534 | MobiDBLite | consensus disorder prediction | 515 | 534 | - | - | |
Ahy15g1337 | 534 | ProSitePatterns | Zinc finger PHD-type signature. | 337 | 388 | IPR019786 | - | |
Ahy15g1337 | 534 | PANTHER | HOMEOBOX PROTEIN HAT3.1 | 119 | 506 | - | - | |
Ahy15g1337 | 534 | SUPERFAMILY | FYVE/PHD zinc finger | 329 | 396 | IPR011011 | - | |
Ahy15g1337 | 534 | SMART | PHD_3 | 336 | 389 | IPR001965 | - | |
Ahy15g1337 | 534 | MobiDBLite | consensus disorder prediction | 96 | 115 | - | - | |
Ahy15g1337 | 534 | MobiDBLite | consensus disorder prediction | 148 | 184 | - | - | |
Ahy15g1337 | 534 | PANTHER | POLYCOMB-LIKE TRANSCRIPTION FACTOR | 119 | 506 | - | - | |
Ahy15g1337 | 534 | MobiDBLite | consensus disorder prediction | 423 | 510 | - | - | |
Ahy15g1337 | 534 | MobiDBLite | consensus disorder prediction | 464 | 495 | - | - | |
Ahy15g1337 | 534 | ProSiteProfiles | Zinc finger PHD-type profile. | 334 | 391 | IPR019787 | - | |
Ahy15g1337 | 534 | MobiDBLite | consensus disorder prediction | 170 | 184 | - | - | |
Ahy15g1337 | 534 | CDD | PHD_PRHA_like | 336 | 388 | IPR045876 | - | |
Ahy15g1337 | 534 | Pfam | PHD-finger | 336 | 391 | IPR019787 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ahy15g1337 | Ahy-Chr15 | 22053364 | 22064370 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ahy15g1337 | 244 | 472 | Homeobox Transcription Factor Family | AT3G19510 | 59.091 | 4.94e-88 | 284 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | PHD | Ahy15g1337 | PHD | 5.00E-09 | CL0390 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ahy15g1337 | - | - | adu:107488674 | 1021.54 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Ahy15g1337 | 15 | 22053364 | 22064370 | Ahy15g1337 | 15 | 22053364 | 22064370 | ECH |