Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g1301 ATGGCGTTGTGTTTTGTTGTGTTACTCCTATCACTAGCAGATAAACGGGTTTCAACTTGGGAAGAAGCAGAAAGATCAAAAAAGATTCGTTCTCCAATGATTCCGAAATACATTGAATTAGTGATTCTTGTTTGCTCTCTTTCTCTGGTTTCACAAGTTTGCTATGCCGACCCTCCTTATGAGATTTGCTCCAGCCATGAAAATGGGAGCACCTTCCAGAACAATCTAAACAACCTTCTCCAATCCCTACCGTCCAATGCATCAGCCTCTAAGTTCTATAACACATCATATGGGAACGCCACAGAAAGAGTGTATGGGCTCTACATGTGCCTTGACTTCATCTCAAGCAAAGCTTGCCAGAACTGCATAGCCACCACAATAGAGGACATCCTCAAACTCTGTCCCCAATCACAAGAAGCTGTTCTTTGGGAGGAGAGCTGTCAGATACGTTATTCCAATACCAACTTCATCGGCACGCTGAATGACACAGGGAACATAGGCAAAGACAATGTTCAAAATGTGTCAGAACCACACAAATTTCAGTCTTCTGTGAACCAGATGCTGAGTAATCTTTCGTCCACTGCAGCTTTTAATGTTTCGGCAAACATGTATGCCACCGGAGAAGCTCCCTTTGGAGATGAAACAATATATGCCTTAGTGCAGTGCACAAGAGATTTATCAGCCAATGATTGCAGCAAGTGCCTCAAAAGTGCTATGAGAGACATACCAAGCTGTTGCTATGGCTCCATCGGTGCCAGAGTCCTGAGCCGCAGTTGTTACCTCAGATATGAATTTTATCCCTTCTATCTTGGTGCCACAGGGCCGTTAAGTCCTTCACCCCACACAAATCAAGGCAAAAATAGCAAAGTATGGATTATTACGGGAATTGCAGTTGCACTTGTCCTATGCTTGGCAATTATTTTCATTTATTGCATGTACTTTATACGGAACAAGAAAACACACAAGCGGGATGAAGCAGTGTTCCATCATCCAGATTTTCCACGATTAAATGGCGTAATATCCGAGGACTCCCCTTATATTGATTTTGGATCACTTTGTGTTGCTACCAAAAACTTTTCTGATTCAAATAAACTTGGACAAGGTGGCTTTGGTCCAGTTTACAAGGGGATTCTAAGCAATGAGCAGGAGGTAGCAATCAAGAGGCTCTCAACCTGTTCTGAGCAGGGCTCAGAGGAATTCATAAACGAGGTTCTGCTCATAATGAAGCTTCAACACAAAAATCTTGTAAAGCTTCTTGGATTTTGTGTAGATGAGGAAGAGAAGCTTCTTGTATATGAATATTTGCCCAACGGTAGCCTTGATGTACTCCTTTTCGATCCCAACGAACGTGCAAAGCTGGTTTGGACGAAACGCCTTGATATAATAGATGGATTAGCAAGGGGGATTCTTTATCTTCACGAAGACTCTCGACTTAAAATTATCCATAGAGACCTAAAAGCAAGCAATGTGTTGTTGGACTCAGACATGAATCCAAAGATCTCTGACTTTGGAATGGCAAAAATATTCGCAGGGAATGAAGGCGAAGCTAACACGGCTACAATAGTTGGCACATATGGATATATGGCACCGGAGTATGCTATGGAGGGACTATATTCCATAAAATCTGATGTTTTTGCATATGGAGTACTAGTTCTTGAGATCATTACAGGGAAGCATAACGCAGGCTTCTTCCACTCTAAAAGTACTCCTAGTCTTCTAACATATGCATGGCATCTATGGAATGAGGGGAAGGGACTAGAGTTAAAGGATCCCTTGTTAGGTGATTCATGCCAAGAAGATGAGTTCTTGAGATGCATGAATATTGGACTGCTGTGTGTTCAAGAAGATGCATATGATAGGCCAAGCATGTCTTCTGTTGTTCTAATGTTGAAGAATGAATCAGCAATAGTTGGCCAACCAGCGCGACCACCTTTCTCAGTAGGGAAATTCAATGACAATGATGGGCTTCACCCACACTCTAGACAATGCTCTATCACTTTCTTAACTGATTCTGACATATTATTGCCTCGTGACTGA 2037 0.4222 MALCFVVLLLSLADKRVSTWEEAERSKKIRSPMIPKYIELVILVCSLSLVSQVCYADPPYEICSSHENGSTFQNNLNNLLQSLPSNASASKFYNTSYGNATERVYGLYMCLDFISSKACQNCIATTIEDILKLCPQSQEAVLWEESCQIRYSNTNFIGTLNDTGNIGKDNVQNVSEPHKFQSSVNQMLSNLSSTAAFNVSANMYATGEAPFGDETIYALVQCTRDLSANDCSKCLKSAMRDIPSCCYGSIGARVLSRSCYLRYEFYPFYLGATGPLSPSPHTNQGKNSKVWIITGIAVALVLCLAIIFIYCMYFIRNKKTHKRDEAVFHHPDFPRLNGVISEDSPYIDFGSLCVATKNFSDSNKLGQGGFGPVYKGILSNEQEVAIKRLSTCSEQGSEEFINEVLLIMKLQHKNLVKLLGFCVDEEEKLLVYEYLPNGSLDVLLFDPNERAKLVWTKRLDIIDGLARGILYLHEDSRLKIIHRDLKASNVLLDSDMNPKISDFGMAKIFAGNEGEANTATIVGTYGYMAPEYAMEGLYSIKSDVFAYGVLVLEIITGKHNAGFFHSKSTPSLLTYAWHLWNEGKGLELKDPLLGDSCQEDEFLRCMNIGLLCVQEDAYDRPSMSSVVLMLKNESAIVGQPARPPFSVGKFNDNDGLHPHSRQCSITFLTDSDILLPRD* 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g1301 678 SMART serkin_6 359 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy15g1301 678 Gene3D - 166 268 IPR038408 -
Ahy15g1301 678 Gene3D - 60 156 IPR038408 -
Ahy15g1301 678 PANTHER CYSTEINE-RICH RECEPTOR-LIKE KINASE 85 672 - -
Ahy15g1301 678 ProSiteProfiles Gnk2-homologous domain profile. 162 268 IPR002902 -
Ahy15g1301 678 Pfam Protein tyrosine and serine/threonine kinase 362 627 IPR001245 GO:0004672|GO:0006468
Ahy15g1301 678 Pfam Salt stress response/antifungal 172 265 IPR002902 -
Ahy15g1301 678 Pfam Salt stress response/antifungal 66 153 IPR002902 -
Ahy15g1301 678 Gene3D Phosphorylase Kinase; domain 1 331 434 - -
Ahy15g1301 678 SUPERFAMILY Protein kinase-like (PK-like) 345 657 IPR011009 -
Ahy15g1301 678 ProSitePatterns Serine/Threonine protein kinases active-site signature. 480 492 IPR008271 GO:0004672|GO:0006468
Ahy15g1301 678 ProSiteProfiles Gnk2-homologous domain profile. 54 156 IPR002902 -
Ahy15g1301 678 CDD STKc_IRAK 365 632 - -
Ahy15g1301 678 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 85 672 - -
Ahy15g1301 678 Gene3D Transferase(Phosphotransferase) domain 1 435 639 - -
Ahy15g1301 678 ProSiteProfiles Protein kinase domain profile. 359 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g1301 Ahy-Chr15 21211590 21214285 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g1301 47 653 Receptor kinase-like Gene Family AT4G05200 43.533 2.35e-178 522
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ahy15g1301 PK_Tyr_Ser-Thr 5.10E-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g1301 - - ahf:112749922 1348.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g1301 15 21211590 21214285 Ahy15g1301 15 21211590 21214285 ECH