Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g1263 ATGGCAGAACCTGCATATACCGTCGCATCCGACAGCGAGACCACCGGAGAGGAAAGAACATATACTTTACCCGAAATAGCAATTGGAATTGACATTGGCACATCACAATGCAGTATTGCAGTGTGGAATGGTTCCCGAGTGGAGCTTTTGAAGAACACAAGGAACCAGAAGATTATGAGATCATATGTAACCTTCAAAGATGACATCCCTTCCGGTGGAGTCAGCAGTCAACTCTCCCACGAGGGTGAGTTGTTGTCCGGAGCCACAGTTTTTAACATGAAACGCTTGATCGGCAGAGTTGACACTGACCCTGTTGTCCATGCAAGCAAGAATCTCCCATTTCTGGTGCAGACATTGGACATTGGTGTTCGCCCGTTTATTGCTGCATTGGTGAACGATATGTGGAGATCCACCACTCCGGAAGAAGTGCTGGCAATATTTCTGGTGGAACTAAGAGCACTGGCTGAAGCTCAGGTGAAAAGGCCAATAAGGAATGTGGTTCTTACAATTCCTGTTTCATTCAGTCGATTTCAGCTTACGCGCATCGAGCGTGCTTGCGCAATGGCTGGCCTTCATGTGCTCAGGCTGATGCCCGAACCGACAGCCGTGGCTTTGCTATATGCGCAGCACCAACAGCAGGCTTCTCATGAGAATATGGGCAGTGGAAGTGAGAAAATTGCTCTCATTTTCAACATGGGTGCTGGTTATTGTGATGTTGCTGTGACAGCTACTGCTGGAGGAGTTTCTCAGATAAAAGCCTTGGCTGGAAGTACAATTGGTGGAGAAGACTTGCTTCAAAATATGATGCGTCATCTCTTGCCTGATTCTGAAAACATATTCAAGAGTCACGGGGTCAAAGAAATTGAATCAATGGCATTGCTTCGGGTTGCAACCCAGGACGCAATTCACCGGCTTTCCTCCGACAACAATGTCCAGGTTGATGTAGACTTGGGAAATGGGGTGAAGATAAACAAGGTTGTTGATAGGGAGGAGTTTGAGGAAGTAAATAGGAGCGTGTTCGAGAAGTGCGAAAGCTTAATTATTCAGTGTTTGCAGGATGCAAGAGTAGAAGTTGAGGATGTAAATGATGTGATCATAGTTGGTGGATGTTCTTATATCCCAAGGGTGAAGAATCTTGTTACTAACATCTGTAAGGTAAAGGAACTTTACAAAGATATGAATCCTTTGGAAGCTGCAGTTTGTGGTGCAGCGGTGGAAGGAGCGGTTGCTTCAGGCATCAATGATCCCTTTGGGAACTTAGACTTGTTAACCATTCAGGCCACACCTCTGGCAATCGGAATTCGAGCTGATGGAAACAATTTTGTCCCTGTAATCCCCAGGAATACTACAATGCCTGCAAGGAAGGAGCTTGTTTTCACTACTGTTCATGACAATCAAACTGAGGCATTGATTCTTGTGTATGAAGGTGAGGGGAATAAGGCAGAAGAAAATCACTTGTTGGGGTATTTCAAGATAATGGGAATACCGGCTGCGCCGAAAGGAGTGCCTGAAATCAATGTGTGCATGGACATTGATGCGGCGAATGTGCTGCGAGTTTTAGCCGGTGTTGTGATGCCTGGATCACGCCAGCCTGCAATTCCTGTTATGGAAGTGAGGATGCCTACAGTGGAAGATGGACATGGTTGGTGTGCTGAGGCCCTGAATAGAAACTACGGTGCTACATTGGATTTGGTTACTATCCAGAAGAAGGCATAA 1716 0.4615 MAEPAYTVASDSETTGEERTYTLPEIAIGIDIGTSQCSIAVWNGSRVELLKNTRNQKIMRSYVTFKDDIPSGGVSSQLSHEGELLSGATVFNMKRLIGRVDTDPVVHASKNLPFLVQTLDIGVRPFIAALVNDMWRSTTPEEVLAIFLVELRALAEAQVKRPIRNVVLTIPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYAQHQQQASHENMGSGSEKIALIFNMGAGYCDVAVTATAGGVSQIKALAGSTIGGEDLLQNMMRHLLPDSENIFKSHGVKEIESMALLRVATQDAIHRLSSDNNVQVDVDLGNGVKINKVVDREEFEEVNRSVFEKCESLIIQCLQDARVEVEDVNDVIIVGGCSYIPRVKNLVTNICKVKELYKDMNPLEAAVCGAAVEGAVASGINDPFGNLDLLTIQATPLAIGIRADGNNFVPVIPRNTTMPARKELVFTTVHDNQTEALILVYEGEGNKAEENHLLGYFKIMGIPAAPKGVPEINVCMDIDAANVLRVLAGVVMPGSRQPAIPVMEVRMPTVEDGHGWCAEALNRNYGATLDLVTIQKKA* 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g1263 571 Gene3D - 91 146 - -
Ahy15g1263 571 PANTHER HEAT SHOCK 70 KDA PROTEIN 8 4 570 - -
Ahy15g1263 571 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 418 534 IPR029047 -
Ahy15g1263 571 PANTHER HEAT SHOCK PROTEIN 70KDA 4 570 IPR013126 GO:0005524|GO:0140662
Ahy15g1263 571 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 423 529 IPR029047 -
Ahy15g1263 571 Gene3D Actin; Chain A, domain 4 261 342 - -
Ahy15g1263 571 Gene3D - 212 390 - -
Ahy15g1263 571 Pfam Hsp70 protein 27 522 IPR013126 GO:0005524|GO:0140662
Ahy15g1263 571 SUPERFAMILY Actin-like ATPase domain 224 409 IPR043129 -
Ahy15g1263 571 CDD HSP70_NBD 28 408 - -
Ahy15g1263 571 Gene3D - 28 408 - -
Ahy15g1263 571 PRINTS 70kDa heat shock protein signature 54 66 - -
Ahy15g1263 571 PRINTS 70kDa heat shock protein signature 502 518 - -
Ahy15g1263 571 PRINTS 70kDa heat shock protein signature 361 377 - -
Ahy15g1263 571 PRINTS 70kDa heat shock protein signature 421 440 - -
Ahy15g1263 571 PRINTS 70kDa heat shock protein signature 166 186 - -
Ahy15g1263 571 PRINTS 70kDa heat shock protein signature 26 39 - -
Ahy15g1263 571 PRINTS 70kDa heat shock protein signature 393 413 - -
Ahy15g1263 571 SUPERFAMILY Actin-like ATPase domain 26 210 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g1263 Ahy-Chr15 19962478 19965148 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g1263 27 521 Calmodulin-binding Proteins AT3G12580 37.822 4.98e-103 323