Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g1244 ATGGCTTCTTATTACCTTGATGTATTAATACATTGGGTTTTCGTTGTTGTCATTCTTCTCATATCCCTTAAGCTTAAACCATTAGAGTCACAGAAATTAAATAATCCAAGACTGATGCAAGCTCATGCAGCACTTGAAGCATGGACACATTGCATGACCTCTGACCCAAACAAAATCACTTCCACATGGTCTGGCCCCAATGTGTGCAACTACACTGGCATCTACTGTGCACCAGCACCAGATGACTCCACCATTTTTACAGTGGCTGGAATTGACCTTAAGAATGCAAACATATCTGGTTCATTACCTGAAGATCTTGGCCTCTTAACCGACCTAGACTTCTTCCATATAAACTCCAATAGATTCACCGGTCCTCTCCCTAAGAATTTTACCAAACTTGCCTATCTTTATGAGCTTGATATCAGTTTTAACCAATTCTCAGGACCCTTCCCACAAGTTGTTCTTGCCATTCCTTCACTGAGATACTTGGATATTAGGTTCAACAACTTTGCCGGCGACGTTCCTTCGAGCCTTTTCGACCTCAAACTCGACGCTCTTTTCATCAACAATAACAAATTCCAGTTCTCCTTACCACAAAACTTTGGGAACTCACCCGTTTCTGTTATGATATTATCAAACAATGATATAAAGGGTAGTATTCCATCAAGTGTGGCCAAAATGAAGGATACCCTTAATGAGATTATAATATCGAATACGGGGCTAACGGGTCCATTGCCCCAAGAAATAGGGTACTTAGACAAAGTGACAGTGTTTGATGTGAGCTTCAACAGATTGGAGGGAGAACTACCAGGAACCATGCAAGGAATGAAGAGCTTGGAACAATTGGTTTTAAAGCATAACAATTTCTCAGGTGTGGTTCCGACCGGCATTTGTATGTTGCCTAAGTTGAAGCACTTCGATTGTTCAAATAATTACTTCCATGGTCCATTCCCAAAATGTCCCTTCATTAAACGAAAGCACAATCGGGGAAAATGCATGGGTTTCTAG 1008 0.4107 MASYYLDVLIHWVFVVVILLISLKLKPLESQKLNNPRLMQAHAALEAWTHCMTSDPNKITSTWSGPNVCNYTGIYCAPAPDDSTIFTVAGIDLKNANISGSLPEDLGLLTDLDFFHINSNRFTGPLPKNFTKLAYLYELDISFNQFSGPFPQVVLAIPSLRYLDIRFNNFAGDVPSSLFDLKLDALFINNNKFQFSLPQNFGNSPVSVMILSNNDIKGSIPSSVAKMKDTLNEIIISNTGLTGPLPQEIGYLDKVTVFDVSFNRLEGELPGTMQGMKSLEQLVLKHNNFSGVVPTGICMLPKLKHFDCSNNYFHGPFPKCPFIKRKHNRGKCMGF* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g1244 335 Pfam Leucine rich repeat 255 312 IPR001611 GO:0005515
Ahy15g1244 335 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 24 333 - -
Ahy15g1244 335 Gene3D Ribonuclease Inhibitor 39 204 IPR032675 -
Ahy15g1244 335 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 6 24 333 - -
Ahy15g1244 335 Gene3D Ribonuclease Inhibitor 205 334 IPR032675 -
Ahy15g1244 335 SUPERFAMILY L domain-like 52 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g1244 Ahy-Chr15 19780260 19781267 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g1244 33 333 Leucine-rich Repeat extension Gene Families AT3G22800 59.603 4.02e-124 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g1244 - - ahf:112748057 679.863