Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g1180 ATGTTTGACACTGGTTACAAGTCACAGTATATTGGAGGCCAGAGGGAGAAGTTTGTAAGGTTGGATGATCTTGATTCTAACATGTCATTCTCAGGCAGACCAAGTTTGATGGATAGGCTAAGATCGATCTTCCATGTTGGCGGCCGCGCAAGGAAGAATCCGTCACAATCCTTTAGGCTAGGAGTGAAGAAAGGATCAGCAGGACTCAGAACATTTGGAAGGTCACTGAAAACTGGTGTAACTACTTGGGCAGTGTTCCCTGAAGATCTCAAAGTTTCAGAGAAGAAAGTGTTTGATCCTCAAGACAAGCACCTTCTCCATTGGAACAAGTTCTTTGAGATCCTCTGCATTTTTTCAGTAGCTGTTGACCCTTTCTTCTTCTATCTCCCTTACTTCAACGTCAAGTCATTCTGCCTCGCCATAGATAGCACGCTGGCGAATTTTACAGCAGCACTGAGGACTGTATTGGATTTTATCTATCTCCTGCGCATAAGCTTTCAGTTCCGAACTGCTTATATCGCGCCTTCATCTCGTGTGTTTGGAAGAGGTGAACTTGTCATAGATCCTGCAAAAATTGCCAGTAGATATTTACAGCGATATTTCATTATCGACTTCATGTCTGTGTTTCCTATGCCACAGATTATAGTGTGGAAATATCTATACAAAACAAGACATTCAGAGGTATTGAGTACAAAAACGGCACTGTTGAGAACTGTGATCCTGCAATATTTTCCAAGATTTCTAAGGTTTCTTCCATTAGCATCGGAAGTTAAAAAGACAGCTGGTGTTTTTGCAGAAAATGCACTGCTTGGAGCCATTTACTATTTGATTTGGTTTATGCTAGCTAGTCATATAACTGGCTCCGTTTGGTACTTACTTGCCATAGAACGCAATGACACATGTTGGAACAATGTTTGTCTTGAAGATAATAGATGTAACAGTCATTTCTTGTACTGTGGAAGTACCAATAAGCACATCCCAGGGTTTGATGCTTGGAAAAATGTCAGTGAGGATGTTCTTGTAAAGAAGTGCTTTGTTGATGGTGAGTTCAATTATGGAATCTTTGCTCAAGCAATCAAGAGTGGTATTGTTGCTTCTGTTGAAGTCTTTCCTAAGTTCTGTTACTGTTTATGGTGGGGCCTTCAAAATCTGAGTACAATTGGCCAAGGGCTTTCAACCAGCACCTACAGTAAAGAGGTGTGGTTTTCCATAGCAATAGCTGTTATGGGGCTCATCCTTTTCGCACTTCTGATTGGAAACATGCAGACATACCTTGACTCAATGTCGGTTCATCTTGACGAAATGAGGATCCAAAGACGTGATTCCGAGCTATGGATGCATCATCGCTCGCTTCCTCCAGAACTAAGGGAAAGAGTCAGACGCTATGATCAATACAAGTGGCTGAATACCCGAGGCGTGGATGAAGAAAGCTTGATGAAGAGCCTTCCAAAAGATTTAAGGAGAGATATCAAACGGCATCTTTGTTTGAATCTGGTTAAAAGGGTTCCTCTCTTTGCTAACATGGAGGAACGCCTGCTCGATGCTATATGCGAGCGACTGAAACCTACTCTGTACACAGAGGGCACTGACATAGTTAGGGAAGGAGACCCTGTCAACGAGATGCTCTTCATCATCCGTGGACGCCTAGAGAGTGTCACCACAGATGGTGGAAGGAGTGGATTCTTTAACAGAGGGCTTCTCAAAGAAGGAGACTTCTGTGGTGAGGAGCTACTAACATGGGCACTAGATCCAAAAGCTGCAGCAAACTTGCCATCATCTACTAGGACAGTGAAGGCCATAAATGAGGTCGAGGCATTCGCATTGGAAGCCGAGGAGCTTAAGTTTGTCGCTTCGCAGTTTAGATACATTCATAGTAGGCAGGTTCAGCATACCTTCAGGTTCTACTCACAGCAATGGAGGACATGGGCCGCTATCTACATTCAAGCCGCGTGGAGGAGGTATATGAGGAGGAAACACACCATGCAAAGAAGGCAGGAGGAAGAGTATTATTATGATTCTGATGACAGTGGTGGTGATTCTGCAAAGGCCTTGGTTAAACGTTCCTCAAGTTCATCTAGCTTTGCCACAACCATGTATGCTTCACGCTTTGCCGCGAATGTACTTCACGGTCATAGGCTTCGTGAAGCAGGTAGTTCCACTAGTCTAGGAAGAATTCAAAAACCATCTGAACCTGACTTCAGTCATTATGGTCCAAAGTGA 2220 0.436 MFDTGYKSQYIGGQREKFVRLDDLDSNMSFSGRPSLMDRLRSIFHVGGRARKNPSQSFRLGVKKGSAGLRTFGRSLKTGVTTWAVFPEDLKVSEKKVFDPQDKHLLHWNKFFEILCIFSVAVDPFFFYLPYFNVKSFCLAIDSTLANFTAALRTVLDFIYLLRISFQFRTAYIAPSSRVFGRGELVIDPAKIASRYLQRYFIIDFMSVFPMPQIIVWKYLYKTRHSEVLSTKTALLRTVILQYFPRFLRFLPLASEVKKTAGVFAENALLGAIYYLIWFMLASHITGSVWYLLAIERNDTCWNNVCLEDNRCNSHFLYCGSTNKHIPGFDAWKNVSEDVLVKKCFVDGEFNYGIFAQAIKSGIVASVEVFPKFCYCLWWGLQNLSTIGQGLSTSTYSKEVWFSIAIAVMGLILFALLIGNMQTYLDSMSVHLDEMRIQRRDSELWMHHRSLPPELRERVRRYDQYKWLNTRGVDEESLMKSLPKDLRRDIKRHLCLNLVKRVPLFANMEERLLDAICERLKPTLYTEGTDIVREGDPVNEMLFIIRGRLESVTTDGGRSGFFNRGLLKEGDFCGEELLTWALDPKAAANLPSSTRTVKAINEVEAFALEAEELKFVASQFRYIHSRQVQHTFRFYSQQWRTWAAIYIQAAWRRYMRRKHTMQRRQEEEYYYDSDDSGGDSAKALVKRSSSSSSFATTMYASRFAANVLHGHRLREAGSSTSLGRIQKPSEPDFSHYGPK* 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g1180 739 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 12 736 - -
Ahy15g1180 739 CDD CAP_ED 504 635 IPR000595 -
Ahy15g1180 739 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 8-RELATED 12 736 - -
Ahy15g1180 739 SMART cnmp_10 504 635 IPR000595 -
Ahy15g1180 739 Pfam Cyclic nucleotide-binding domain 525 614 IPR000595 -
Ahy15g1180 739 Gene3D - 109 428 - -
Ahy15g1180 739 SUPERFAMILY Voltage-gated potassium channels 100 425 - -
Ahy15g1180 739 ProSiteProfiles IQ motif profile. 640 668 IPR000048 GO:0005515
Ahy15g1180 739 MobiDBLite consensus disorder prediction 716 739 - -
Ahy15g1180 739 Pfam Ion transport protein 108 430 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Ahy15g1180 739 Gene3D Jelly Rolls 502 622 IPR014710 -
Ahy15g1180 739 SUPERFAMILY cAMP-binding domain-like 435 623 IPR018490 -
Ahy15g1180 739 Gene3D Helix hairpin bin 432 495 - -
Ahy15g1180 739 ProSiteProfiles cAMP/cGMP binding motif profile. 504 587 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g1180 Ahy-Chr15 18671997 18677773 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g1180 6 733 Ion Channels AT1G15990 67.072 0.0 979
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g1180 K05391 - gmx:100810453 1152.12