Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g1176 ATGGATCCTTACGATGATATTCTCCCAACGGCTCCTGCTGGGCGCGGTCGTGCTGGGGCAAAGTTCGCTCCGAAGGTCAAACCGAAACCGGTGCCTCGGAAGGAAATTTCTGCTGAAAAACATGAAATCTCGTCTAAAGATGGAGAGGGAGAACGTGTTGCTTCATCCACCATCACCAGCAGTTCAAATTTAGAGGATGCCACAAAATCTCAAATGGCAAATCCTCAGCAAGTTGGTGTAAATGTAGATACTGCAGCCTTAGTGGATGCTCAACCTTCCACAGATGCATCGACTGAAGTTGAGTCAGCTCGTGAGGAAGATCCTGTAGCTTTGGAAGGGAGCCGACATTCTAATTTTGTTCCTGAGACCAATCTCAGTAATGACTCAACACATCCAGTTCAAACTGCTGATTCTGTAGAGAAGCTATCAAATAATGTAGCTATTCTATCTACAATTTGCTCAACCGGAGGTAGTATGGGAGATCCTGCTAAAAATGTAAAAGAGCCAGTTCTTGATAGCAACAACTGCTTGGGACTTGGTGATGATTTGATGCAAGTTGGCCCGGATGTGGGCTTTGAAAATGCTTCAGATAATGATGCTGCAATACTTGAGAGCAACATTCAATCGAACCTTATCTTTGGAAGAGAACGAGAGGCAGAGTCTGAGAAATTTGAATTGGATCCTTTTTGTGAAGTCCTCCCTGATCCTGGCACTAGGACTGCTCGTAAGTTTCAACCCAAGATTAAGCCACGACCTAGAGTAGGCGCAAAACCTGCTGTTGCTTCTGCTTCATCTAATGATATGATGGCAAGGTCTGTTGAGTTGCCTACATTTTGCATGAATGAAGTTCAATCTTTTCAGTCTAGTGATGATGGCATTAGTATGTTAAATCAACCAAGCAATTCACCTGTACCCACATTAGAGATTCCTATGGCAACTGATTTATCAAGTAAGTTTGATTATGTGGACTCAAGTATTCCATTCTCTAAAGACAACAATAATTTGGCAGCAGTCAGTGCTTCCCAACTGGATTCTCTCGATGCTGTGTTTTCTGATGTTGCAGTTCATAATGGAACTAGGGATTTGCCTTCTAGTGTTGGTAAATCAGCTGCAGAGAGTGCAGACATTTTTGCTGGGTTGGAATCCATTGATGACTTTACCACCCAAGCTGCCACTACTACAGGAAAACCAATTCTTCAATCGGAAACAGAGGAAGTTGTGGACTTGAGTCCTGGCTGCCCAGTTGATAATGTCTCAGATTATCAGTCCAAGAAAACTGACAACGATCCAGCTTCTGAAATCCCAGTGGATGAAGAACTGACAAATTCTCCAAATAGTCCCACATTGGCTGATCTTATGCAGGATGCTAATGGAAGAAAAAAGGAAGACGCAGTGTGGAGTTCTCTTAGGAAGCGCAAAAAATCTGGCGCTAATGAGGAGGATAAAGGTGTTAAAACTTCAAGGCAGCGGAGGAAGCAAGCAACTCATAAACCTGTTAGCAACTCGGCGAATGAGGATGATGATGATGATGACGAACTTGACCCTCCCTATAATCCGTATAGAGATGAACTTGAAGAGAATGATGAAGAATTTGAAGTGGATGACTCCTCCAAGAAGAAGGCATCATTGAATTCAACAAAGAAATCAGTGGCTAAAAATGGAAAAACATCTCAAAAACATAAGAAGGCTAATGAGGATTTAGAAAATGGCAAAAAAGAACCTCCTAAAAGGTTCTCTCATTCAAGCAGACGAAAAAGAAGATGTGTGAACCAAGCACTGCTGGAAATTCCTGAGGATGAACTTGATATGCATACATTGTCTCTCAAGGATATCATTTTACTTGCAGAACACAGGGAGCGGCTGGCAAAAAAGGAGGCAGCAACTTCAAAAACATCTACCAATCAAAGTGGTGGAGATTCCCAACATGAGGCCGAGGCTGGAGCTAATAGTGAAGAGGAGTATTTAGGTTCAGAAGATGATAGAGAAGCAGGTGATGATGAAGCCAGTGAAAGTGTTCCGTTGGCTTCCTCTTTATTCAACTACCAATTCTTCATGGAAAAGACTCCTAGGGGAAAATGGACAAAACATGATAATGAACTGTTCTATGAGGCGGTTAGGCAGTTTGGCACAGATTTTTCTATGATACAACAGCTTTTTCCTGATCGAACACGTCACCAAATTAAGTTGAAGTACAAGAAGGAAGAGCGACAGCATCCTCTACGGTTAGCTGATGCTGTAAATAATCGTTCAAAAGATCATTTTCATTTTAAGATGTTGATTGAGAGACTGCAGCAAGCTTCAGCCAAGGAAGATCAAGACCCTGGTAAAGATGCATCAGGTTCGATGGCAGCAGAGGAGGTTGAGAATTCGGCACCTGGAACTAATGAGGATGTTGGAACAACTGAACAGGAGGAGTTTGCAACAACTGAGCAGGAGGCAAATGTCGAAGATCAACAAGATTCTAAGTCAGTTCCTAGTCCAGAACAATTTGACAATAGTGATGATGAATTAGCAATATGGGCTCAATATAAAAGTGAAATTTAG 2544 0.423 MDPYDDILPTAPAGRGRAGAKFAPKVKPKPVPRKEISAEKHEISSKDGEGERVASSTITSSSNLEDATKSQMANPQQVGVNVDTAALVDAQPSTDASTEVESAREEDPVALEGSRHSNFVPETNLSNDSTHPVQTADSVEKLSNNVAILSTICSTGGSMGDPAKNVKEPVLDSNNCLGLGDDLMQVGPDVGFENASDNDAAILESNIQSNLIFGREREAESEKFELDPFCEVLPDPGTRTARKFQPKIKPRPRVGAKPAVASASSNDMMARSVELPTFCMNEVQSFQSSDDGISMLNQPSNSPVPTLEIPMATDLSSKFDYVDSSIPFSKDNNNLAAVSASQLDSLDAVFSDVAVHNGTRDLPSSVGKSAAESADIFAGLESIDDFTTQAATTTGKPILQSETEEVVDLSPGCPVDNVSDYQSKKTDNDPASEIPVDEELTNSPNSPTLADLMQDANGRKKEDAVWSSLRKRKKSGANEEDKGVKTSRQRRKQATHKPVSNSANEDDDDDDELDPPYNPYRDELEENDEEFEVDDSSKKKASLNSTKKSVAKNGKTSQKHKKANEDLENGKKEPPKRFSHSSRRKRRCVNQALLEIPEDELDMHTLSLKDIILLAEHRERLAKKEAATSKTSTNQSGGDSQHEAEAGANSEEEYLGSEDDREAGDDEASESVPLASSLFNYQFFMEKTPRGKWTKHDNELFYEAVRQFGTDFSMIQQLFPDRTRHQIKLKYKKEERQHPLRLADAVNNRSKDHFHFKMLIERLQQASAKEDQDPGKDASGSMAAEEVENSAPGTNEDVGTTEQEEFATTEQEANVEDQQDSKSVPSPEQFDNSDDELAIWAQYKSEI* 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g1176 847 MobiDBLite consensus disorder prediction 627 643 - -
Ahy15g1176 847 SUPERFAMILY Homeodomain-like 691 739 IPR009057 -
Ahy15g1176 847 MobiDBLite consensus disorder prediction 765 836 - -
Ahy15g1176 847 MobiDBLite consensus disorder prediction 558 576 - -
Ahy15g1176 847 MobiDBLite consensus disorder prediction 652 666 - -
Ahy15g1176 847 SMART sant 689 737 IPR001005 -
Ahy15g1176 847 MobiDBLite consensus disorder prediction 28 49 - -
Ahy15g1176 847 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 685 733 IPR017930 -
Ahy15g1176 847 PANTHER RNA POLYMERASE III TRANSCRIPTION INITIATION FACTOR B 239 827 - -
Ahy15g1176 847 MobiDBLite consensus disorder prediction 793 830 - -
Ahy15g1176 847 MobiDBLite consensus disorder prediction 1 112 - -
Ahy15g1176 847 CDD SANT 692 733 IPR001005 -
Ahy15g1176 847 ProSiteProfiles Myb-like domain profile. 685 735 IPR001005 -
Ahy15g1176 847 Pfam Myb DNA-binding like 684 766 IPR039467 -
Ahy15g1176 847 MobiDBLite consensus disorder prediction 438 452 - -
Ahy15g1176 847 ProSiteProfiles SANT domain profile. 692 736 IPR017884 -
Ahy15g1176 847 MobiDBLite consensus disorder prediction 50 98 - -
Ahy15g1176 847 Gene3D - 693 756 - -
Ahy15g1176 847 MobiDBLite consensus disorder prediction 623 670 - -
Ahy15g1176 847 MobiDBLite consensus disorder prediction 403 588 - -
Ahy15g1176 847 MobiDBLite consensus disorder prediction 455 488 - -
Ahy15g1176 847 PANTHER TRANSCRIPTION FACTOR TFIIIB COMPONENT B'' HOMOLOG 239 827 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g1176 Ahy-Chr15 18633508 18639570 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Ahy15g1176 Myb_DNA-bind_7 1.00E-26 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g1176 K15198 - gmx:100792788 734.947