Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g1058 ATGAGCTTCATGGACTGGGATTTGCACGCTATAGTGAGAGGATGCACCAATACTCATCAATCCGACAACATCCTAGGCGATCTTAACTATTTCCAGTTAAGTCCTCAACAAGAAATAGATGAACGTTTCTTCAAGTCTCACCAATTCTCAGAAACAGAAACCATCACTACTGCCATCGTTGATGATGAATTGGAAGAGCTTTACAAACCTTTCTACCCTTCTACAACTAGTTCCCACCCTACCTCCGCTGAAGTCAACAAAGTACTCCATCTCAAACCTTCAGATCCAACACCATCTAAATGTAAAAGAAGGAAGAAGAATGAAGAGAAGAATAAGAGGGTAGTGAAGCGGGTGAGAGAAGAAGAAGGGTACAGTGATGGATGGGCATGGCGTAAATACGGGCAGAAACCAATAAAAGGATCAGAGTATCCGCGGAGCTATTACAGGTGTAGCAGCTGCAAAGGATGCTTGGCTAGGAAACAAGTTGAACGGAGCCATTCCGATCCACAAGTTTTCATAGTTACCTACACAGCTGAACACACCCATCCTCCTCACCCCATCACTACTATTCCAACAAACTCACAAGCACAAGGAACAGTAGTAGGAAGAGGCTGGAAGAGGAGAACCAATCTATAG 636 0.4403 MSFMDWDLHAIVRGCTNTHQSDNILGDLNYFQLSPQQEIDERFFKSHQFSETETITTAIVDDELEELYKPFYPSTTSSHPTSAEVNKVLHLKPSDPTPSKCKRRKKNEEKNKRVVKRVREEEGYSDGWAWRKYGQKPIKGSEYPRSYYRCSSCKGCLARKQVERSHSDPQVFIVTYTAEHTHPPHPITTIPTNSQAQGTVVGRGWKRRTNL* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g1058 211 SUPERFAMILY WRKY DNA-binding domain 120 184 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy15g1058 211 Gene3D WRKY domain 107 185 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy15g1058 211 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 5 186 IPR044810 GO:0003700
Ahy15g1058 211 MobiDBLite consensus disorder prediction 186 200 - -
Ahy15g1058 211 ProSiteProfiles WRKY domain profile. 119 185 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy15g1058 211 MobiDBLite consensus disorder prediction 183 211 - -
Ahy15g1058 211 MobiDBLite consensus disorder prediction 75 112 - -
Ahy15g1058 211 SMART WRKY_cls 124 184 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy15g1058 211 PANTHER WRKY TRANSCRIPTION FACTOR 63-RELATED 5 186 - -
Ahy15g1058 211 Pfam WRKY DNA -binding domain 126 183 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g1058 Ahy-Chr15 16231385 16232659 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g1058 5 183 WRKY Transcription Factor Family AT4G01250 41.919 4.19e-39 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Ahy15g1058 WRKY 2.50E-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g1058 K13426 K13425 gmx:102667019 153.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g1058 15 16231385 16232659 Ahy13g2783 13 107803181 107804587 PCT
Ahy15g1058 15 16231385 16232659 Ahy3g2453 3 106177213 106178596 PCT